PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc039757.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family MYB
Protein Properties Length: 218aa    MW: 25289.4 Da    PI: 9.5509
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc039757.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding491.4e-151461148
                           TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
        Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                           +g+W+++Ed +l ++v+++G  +W+  +++ g+ R++k+c++rw +yl
  Cse_sc039757.1_g010.1 14 KGAWSEDEDNQLRNYVQRYGHWNWRELPKYAGLARCGKSCRLRWMNYL 61
                           79******************99************************97 PP
2Myb_DNA-binding58.71.3e-1867112148
                            TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
        Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                            rg++++eE++l+ +++kq+G++ W++Ia++++ gR+++++k++w+++l
  Cse_sc039757.1_g010.1  67 RGNFSKEEEDLIEKYHKQMGNK-WSAIAAKLP-GRSDNEIKNHWHTHL 112
                            89********************.*********.************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 218 aa     Download sequence    
MVRAPCVDKN GIKKGAWSED EDNQLRNYVQ RYGHWNWREL PKYAGLARCG KSCRLRWMNY  60
LRPTIKRGNF SKEEEDLIEK YHKQMGNKWS AIAAKLPGRS DNEIKNHWHT HLKKRAPKHV  120
LDVFKKEEQT SLVEQIMQFN SQPTSGVSTS SNNVLSNESI PSHRLSNESL GSQRVSDDSS  180
SHSSGIERRR FLIDLNQEYV ETLEENEGKG SMIQMKLE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G16490.16e-59MYB family protein