PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc039394.1_g020.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family FAR1
Protein Properties Length: 363aa    MW: 42169.9 Da    PI: 9.2903
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc039394.1_g020.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR123.42e-0739114785
                   FAR1   7 AkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleH 85 
                            A+++GF ++k ++k+    g  ++ +f Cs++g++++e  + ++ +r++++ +t+C  +l+ k  k  +  + kl ++H
  Cse_sc039394.1_g020.1  39 AESIGFLIVKGRTKTY--RGYKYSIEFLCSRHGTSAREGLE-DELERQTSTAKTNCPFRLMAKFIKGRTGWILKLTKQH 114
                            899********98888..6667****************999.8888899999***********9996666677788887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 363 aa     Download sequence    
MKGDNVPKDL RLVIGITSIF GSYHISHHLV DNKLMQFTAE SIGFLIVKGR TKTYRGYKYS  60
IEFLCSRHGT SAREGLEDEL ERQTSTAKTN CPFRLMAKFI KGRTGWILKL TKQHVAPRII  120
LSSLKESDPN NVSGIKMVYN AQDKIRRASR GDLTPIQLLL VHFQRQGYTY YPRVNDHTNE  180
LDEIFFVHLT SYAFWTTYPE IMLMDSTYNT TMFKLPFFTI VGVTPTNTTF SMAFSFLDKE  240
KEPNFKWVLE CVKLVIQEQY YPRVIVTDID LALLGACREE FPNANRLLCR WHINQNVLKH  300
CRHKFDSVKE YESIRWTWDL MMFSGIFVTG CDITTACLCR TLPINIAASA RQQHVELRVN  360
KRC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.15e-11FAR1 family protein