PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc039194.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 603aa MW: 69685.2 Da PI: 7.7555

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc039194.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	52.1	2.2e-16	126	219	3	90
FAR1 3 YneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk......tekerrtraetrtgCkaklkvkkek.dgkwevtklel 83 Y +YA+++GF vrks +k+ r+g ++++ +vC++eg ++ + + ++k++r+++ + tgCka+++ + + k+++t +++ Cse_sc039194.1_g010.1 126 YMKYASKAGFVVRKSCQKRL-RSGIVKQKYLVCNREGCPKGIHVDtldlenSDKQKRSSNLHITGCKARVMFEFIPgSTKYRLTVFDS 212 99**********998887.8898*********99988888999888899999999**********99******* PP FAR1 84 eHnHela 90 HnHel Cse_sc039194.1_g010.1 213 IHNHELE 219 ***96 PP

Sequence ? help Back to Top
Protein Sequence Length: 603 aa Download sequence
MDLIPNSSVS SDPSSSITES DHSSSDPSSS ITVSDDVSVT EFVSEDVVVS DDVSAKYTEE 60 IVAYEQGDES ATIKKLNALK TPESFSTHSN FDTPGGTVYY IPKVPVDVLL AKGNVFNSVD 120 ECISAYMKYA SKAGFVVRKS CQKRLRSGIV KQKYLVCNRE GCPKGIHVDT LDLENSDKQK 180 RSSNLHITGC KARVMFEFIP GSTKYRLTVF DSIHNHELER KEYKHLSKTE RQLTYAEQLF 240 IVKAASVNIG ATRAHHLLTG LKGSYLLVHG DSDAQMLIAK MENRHKHVPD FSFDYLVENA 300 ELSAIFWADE VSKYKMMFVP FTAIDNHRKC VTICSKIYDH TDFKRKFNQI VWNMYIGPDE 360 FEYQWGKLLD EFNLHNHKWL TKMFRIRSCW IPAFFVDSPL CGLMRITSRS KSENSFFSHF 420 TNSGSTLMNF MNCFETAMEK QRHIQERLDH KSIDYVPTLR TYLKIERHAS NVYTRPLFEL 480 VQAEIFAGTW FCQIDTKSLV EVSEVSVIKE KKFVDEVMEK KKAKKKEKFK KKGDDTDKNE 540 EEEEPINLFH REDGLYKNAN VEMIPNQYIL RRWTKNLIPA GLRNKRNRYG EKNEIVENYY 600 FYC

Sequence ? help Back to Top

Protein Sequence Length: 603 aa Download sequence

MDLIPNSSVS SDPSSSITES DHSSSDPSSS ITVSDDVSVT EFVSEDVVVS DDVSAKYTEE  60
IVAYEQGDES ATIKKLNALK TPESFSTHSN FDTPGGTVYY IPKVPVDVLL AKGNVFNSVD  120
ECISAYMKYA SKAGFVVRKS CQKRLRSGIV KQKYLVCNRE GCPKGIHVDT LDLENSDKQK  180
RSSNLHITGC KARVMFEFIP GSTKYRLTVF DSIHNHELER KEYKHLSKTE RQLTYAEQLF  240
IVKAASVNIG ATRAHHLLTG LKGSYLLVHG DSDAQMLIAK MENRHKHVPD FSFDYLVENA  300
ELSAIFWADE VSKYKMMFVP FTAIDNHRKC VTICSKIYDH TDFKRKFNQI VWNMYIGPDE  360
FEYQWGKLLD EFNLHNHKWL TKMFRIRSCW IPAFFVDSPL CGLMRITSRS KSENSFFSHF  420
TNSGSTLMNF MNCFETAMEK QRHIQERLDH KSIDYVPTLR TYLKIERHAS NVYTRPLFEL  480
VQAEIFAGTW FCQIDTKSLV EVSEVSVIKE KKFVDEVMEK KKAKKKEKFK KKGDDTDKNE  540
EEEEPINLFH REDGLYKNAN VEMIPNQYIL RRWTKNLIPA GLRNKRNRYG EKNEIVENYY  600
FYC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-20	FAR1 family protein