PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc039173.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family ARR-B
Protein Properties Length: 534aa    MW: 60392.1 Da    PI: 6.7647
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc039173.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like88.18.3e-28299351255
                G2-like   2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                             +++Wt+eLH++Fv+aveqL G ++A+P++ilelm+v+gLt+++v+SHLQkYRl
  Cse_sc039173.1_g010.1 299 IKVDWTSELHKKFVQAVEQL-GVDQAIPSRILELMNVEGLTRHNVASHLQKYRL 351
                            5899****************.********************************8 PP
2Myb_DNA-binding44.24.3e-14301350248
                            SSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
        Myb_DNA-binding   2 grWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 
                              WT e+++++v+av+qlG +   +++I + m+ +g+t+ ++ s++qky+
  Cse_sc039173.1_g010.1 301 VDWTSELHKKFVQAVEQLGVDqaIPSRILELMNvEGLTRHNVASHLQKYR 350
                            57***********************************************7 PP
3Response_reg30.81.5e-11201261109
                            EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHH CS
           Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeeda 86 
                            vl+ d++ + ++ +++ le+ +y +v+ + ++ eal  + +k   +++ ++ ++  + dG   +k +++++ +lp i+ +  +  +++
  Cse_sc039173.1_g010.1  20 VLLLDEDINSANEIKSKLEEMDY-VVTMFYTANEALSAVSDKSrsFHVAIVEVRADNEDGR--FKFLESAK-ELPTIMTSNVNCISTI 103
                            789999999999***********.***************777777***************5..55565555.899999999999**** PP

                            HHHHHTTESEEEESS--HHHHHH CS
           Response_reg  87 lealkaGakdflsKpfdpeelvk 109
                             +++ +Ga +fl+Kp ++++l++
  Cse_sc039173.1_g010.1 104 MKCIALGAVEFLEKPLSEDKLRN 126
                            ********************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 534 aa     Download sequence    
MVCTANDLLE WKDFPKGLRV LLLDEDINSA NEIKSKLEEM DYVVTMFYTA NEALSAVSDK  60
SRSFHVAIVE VRADNEDGRF KFLESAKELP TIMTSNVNCI STIMKCIALG AVEFLEKPLS  120
EDKLRNIWQH VAHKAFNAGP KDQAEALKSK NASAPEVHLK TDIKVEVSQN QEHNVEVSVE  180
GDKYPAPSTP QLKHGIRLVD NGDCQDHEHD HDQVQTNLST EKECVDHDDP SKFVETICKD  240
LVVYTTVITE TASSKSLEEG ILKPFTSECR PDPKDDGKKP NEVSENPSSR ATKSSRRKIK  300
VDWTSELHKK FVQAVEQLGV DQAIPSRILE LMNVEGLTRH NVASHLQKYR LQRRHILPKE  360
SARKWPQTRH STPRNYYSPR PIMAYPPYHS NHTLPANQVY PAWPPPTNYA PPPQMWSPPY  420
YQAWHSSENW MWNPYPGVQA EAWGCPTLQA HPSFPQNASQ YHSRNSMQSG QTMPKNSLDN  480
YPGDEVIDKV VKEAINKPWL PLPLGLKPPS TESVISELSR QGISTVPPRI SSSR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G18020.31e-126ARR-B family protein