PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc039116.1_g040.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family MYB
Protein Properties Length: 156aa    MW: 18272.9 Da    PI: 9.8043
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc039116.1_g040.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding25.53e-081157148
                           TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
        Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                           +g+W  eEd++l+ +++++G  +W+  +r  g+ R + +c++ w  yl
  Cse_sc039116.1_g040.1 11 KGAWNVEEDQKLIMYINRYGIWNWSQMPRFAGLSRVR-SCRLQWIYYL 57
                           79******************99**********66666.******8876 PP
2Myb_DNA-binding40.94.7e-1364121248
                            SSS-HHHHHHHHHHHHHTTTT............-HHHHHHHHTTTS-HHHHHHHHHHHT CS
        Myb_DNA-binding   2 grWTteEdellvdavkqlGgg............tWktIartmgkgRtlkqcksrwqkyl 48 
                            g+++ eE+e+++  + qlG+              W++Ia +++ gR+++++k++w+++l
  Cse_sc039116.1_g040.1  64 GNFSGEEEEIILVSHSQLGNSignlityvylpyKWSAIALRLP-GRSDNDVKNHWHSHL 121
                            78999***************9**********************.************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 156 aa     Download sequence    
MEGEMSTDLK KGAWNVEEDQ KLIMYINRYG IWNWSQMPRF AGLSRVRSCR LQWIYYLISN  60
VKNGNFSGEE EEIILVSHSQ LGNSIGNLIT YVYLPYKWSA IALRLPGRSD NDVKNHWHSH  120
LKKRASEQNL VCGSPWFKIA FCDPMRSRSQ RLMRNA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G28110.11e-36MYB family protein