PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc038998.1_g010.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | HSF | ||||||||
Protein Properties | Length: 166aa MW: 19510.4 Da PI: 9.8568 | ||||||||
Description | HSF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HSF_DNA-bind | 59.1 | 1.2e-18 | 14 | 101 | 4 | 103 |
HHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXX CS HSF_DNA-bind 4 kklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkk 91 k y+i+ ++ ++ +isw n + v+ +ef ++v p +Fk +nf SF+ QLn YgFkk++ + e++ ++F++gk Cse_sc038998.1_g010.1 14 YKDYNIVCNKGTDFIISWVPN---LNVSGGDEFINNVPPLMFKSKNFDSFITQLNNYGFKKMSWDC---------REYAYEWFQEGKP 89 6889***************99...99*************************************988.........47*********** PP XXXXXXXXXXXX CS HSF_DNA-bind 92 ellekikrkkse 103 +ll++ikr++++ Cse_sc038998.1_g010.1 90 HLLKSIKRRTKQ 101 *********976 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 166 aa Download sequence |
HFPTALPPLV NKLYKDYNIV CNKGTDFIIS WVPNLNVSGG DEFINNVPPL MFKSKNFDSF 60 ITQLNNYGFK KMSWDCREYA YEWFQEGKPH LLKSIKRRTK QTISESEKLQ REIKKLESAS 120 KEQDNELNVF KAYVDNTISN QKIILQTMAR TMKSIIDHPH QVRKLH |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 92 | 98 | LKSIKRR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G54070.1 | 1e-21 | HSF family protein |