PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc038661.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 500aa MW: 57243.9 Da PI: 9.0139

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc038661.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	72.7	8.4e-23	74	179	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk................tekerrtraetrtgCkaklkvkkek 72 +fY+eYA+e+GF+vr+ +k++++ng + f+Cs+eg + + k++ ++ +rr+ra++r+gCka++ +++++ Cse_sc038661.1_g010.1 74 QFYKEYAREAGFEVRIGGQKNREKNGFPSVKYFYCSREGLKPPPKTDklqtdkskpdnieavkKVIKRRKRASQRCGCKAQICLRRTE 161 6*************************************99999889*********999999***************** PP FAR1 73 dgkwevtkleleHnHela 90 d+k++v+++ ++HnH+l+ Cse_sc038661.1_g010.1 162 DNKYYVHTFFEKHNHSLV 179 **************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 500 aa Download sequence
MSTTSLNDSV ELVGEPSTPQ STNTVQDNVD VDAQTAPQVG SYQPTPPGSK FWIPEAKKKP 60 VEGTRFDTLD IALQFYKEYA REAGFEVRIG GQKNREKNGF PSVKYFYCSR EGLKPPPKTD 120 KLQTDKSKPD NIEAVKKVIK RRKRASQRCG CKAQICLRRT EDNKYYVHTF FEKHNHSLVH 180 DDDYKYLRAA RKLTFPKQQL LHQLSNANIG PTRAWKVLIQ MGGGFENIGF TDVECRNYRR 240 GLNEFIGQRD AQMVVEKLLS RQEYCTNFSV EYKQHKKDKT LIGLFWVDEQ AKLNYDAFGD 300 VVSFDATFRS NRIKDSFVEA KYEVKYVPSE CLVQCSCLRC VSKTKDISPS SNSARVVDEA 360 LRHIYSDVDE SINHLVGDIE KLHIYMDNQT TLMKKAKLEV PNPPKMNTNE AYARALGVTE 420 PKELDILPPT DINNKGHVIR TRHKANSEIA MQLGDKPKRM CKSCGKYVRH DSRNCTKKKK 480 GLKDQDVDQD FDDAMDIYDS

Sequence ? help Back to Top

Protein Sequence Length: 500 aa Download sequence

MSTTSLNDSV ELVGEPSTPQ STNTVQDNVD VDAQTAPQVG SYQPTPPGSK FWIPEAKKKP  60
VEGTRFDTLD IALQFYKEYA REAGFEVRIG GQKNREKNGF PSVKYFYCSR EGLKPPPKTD  120
KLQTDKSKPD NIEAVKKVIK RRKRASQRCG CKAQICLRRT EDNKYYVHTF FEKHNHSLVH  180
DDDYKYLRAA RKLTFPKQQL LHQLSNANIG PTRAWKVLIQ MGGGFENIGF TDVECRNYRR  240
GLNEFIGQRD AQMVVEKLLS RQEYCTNFSV EYKQHKKDKT LIGLFWVDEQ AKLNYDAFGD  300
VVSFDATFRS NRIKDSFVEA KYEVKYVPSE CLVQCSCLRC VSKTKDISPS SNSARVVDEA  360
LRHIYSDVDE SINHLVGDIE KLHIYMDNQT TLMKKAKLEV PNPPKMNTNE AYARALGVTE  420
PKELDILPPT DINNKGHVIR TRHKANSEIA MQLGDKPKRM CKSCGKYVRH DSRNCTKKKK  480
GLKDQDVDQD FDDAMDIYDS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-34	FAR1 family protein