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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc038579.1_g010.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | FAR1 | ||||||||
Protein Properties | Length: 736aa MW: 85369.1 Da PI: 8.092 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 60 | 7.7e-19 | 54 | 168 | 1 | 90 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk..........................tekerrtraetrtgC 62 +fY +Y+k+ GF+ r+ ++k k t + f+Cs++g +e+++ k ++k+ r+r++ r+gC Cse_sc038579.1_g010.1 54 NFYVAYGKKGGFDCRRGGQYKAKGFSDATLKYFYCSRQGLNEDSNGKsgdsvtdndisgqseisddsnrfgevKKKQPRKRTSFRCGC 141 6*****************************************999999***********************98888899999****** PP FAR1 63 kaklkvkkekdgkwevtkleleHnHela 90 a+l+++k+ + +evtk+e HnH+l+ Cse_sc038579.1_g010.1 142 SASLTINKK-GNIYEVTKFEDGHNHPLV 168 ********9.9***************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 736 aa Download sequence |
MAMFRFCADV ETVRIRDHVG FYVCGKDGTR TWYPDCLEKP IEGCQFISID QAYNFYVAYG 60 KKGGFDCRRG GQYKAKGFSD ATLKYFYCSR QGLNEDSNGK SGDSVTDNDI SGQSEISDDS 120 NRFGEVKKKQ PRKRTSFRCG CSASLTINKK GNIYEVTKFE DGHNHPLVAE KDMIFLKNSR 180 KMGYTKQHFL YQVSNANFGP AVGFRLMKQV YGGFDRVGTT VIDCKNQKKK ISVFIGDRDA 240 QMAVEKLLSR KLHSPSFYVN YYKGDDDKLV GLFWADEEAI KDYASFGDIV SFDATFRSNK 300 YEMVFVPFTG INHHNRCLTF ASGLLADESA GAYIWLLEQF KEAFGKEPEV VITDQDPSMK 360 IAIEECFPNT RHRLCMWHIM QKLTTKVGTA LCNRTDFKQR ICDIVGTALC NRTDFKQRIC 420 DIVWTDQILP EEFETEWDRM INDFELSDNK WLGDMFNMRE RWIPAYLRDV HMAGLMRTTS 480 RSESENHFFG KWTSPHLTLV EFLSHYDTAI EYQRYIERKN DHDSRYKTPK FKTGRPMEKE 540 ACKLYTRTLF FDVQDEILGS YKYCIGLSVV QSENMEKYAI RDTEFRNRKS GDNDFAVYQV 600 DFCKSEMIVQ CSCNRYESYG LLCRHAFYVL RMNNVKEFPR NYLKKRWLKN TKPSRSALPR 660 IIGASDLVRN EVLDMYEIFE STVDRLVHDL SKMHIYKDKL QELFNEAVID IPTVPKCDGK 720 ALSSTSNCFP TANKPV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38180.1 | 2e-92 | FAR1 family protein |