PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc038579.1_g010.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family FAR1
Protein Properties Length: 736aa    MW: 85369.1 Da    PI: 8.092
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc038579.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR1607.7e-1954168190
                   FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk..........................tekerrtraetrtgC 62 
                            +fY +Y+k+ GF+ r+  ++k k     t + f+Cs++g +e+++ k                          ++k+ r+r++ r+gC
  Cse_sc038579.1_g010.1  54 NFYVAYGKKGGFDCRRGGQYKAKGFSDATLKYFYCSRQGLNEDSNGKsgdsvtdndisgqseisddsnrfgevKKKQPRKRTSFRCGC 141
                            6*****************************************999999***********************98888899999****** PP

                   FAR1  63 kaklkvkkekdgkwevtkleleHnHela 90 
                             a+l+++k+  + +evtk+e  HnH+l+
  Cse_sc038579.1_g010.1 142 SASLTINKK-GNIYEVTKFEDGHNHPLV 168
                            ********9.9***************97 PP

Sequence ? help Back to Top
Protein Sequence    Length: 736 aa     Download sequence    
MAMFRFCADV ETVRIRDHVG FYVCGKDGTR TWYPDCLEKP IEGCQFISID QAYNFYVAYG  60
KKGGFDCRRG GQYKAKGFSD ATLKYFYCSR QGLNEDSNGK SGDSVTDNDI SGQSEISDDS  120
NRFGEVKKKQ PRKRTSFRCG CSASLTINKK GNIYEVTKFE DGHNHPLVAE KDMIFLKNSR  180
KMGYTKQHFL YQVSNANFGP AVGFRLMKQV YGGFDRVGTT VIDCKNQKKK ISVFIGDRDA  240
QMAVEKLLSR KLHSPSFYVN YYKGDDDKLV GLFWADEEAI KDYASFGDIV SFDATFRSNK  300
YEMVFVPFTG INHHNRCLTF ASGLLADESA GAYIWLLEQF KEAFGKEPEV VITDQDPSMK  360
IAIEECFPNT RHRLCMWHIM QKLTTKVGTA LCNRTDFKQR ICDIVGTALC NRTDFKQRIC  420
DIVWTDQILP EEFETEWDRM INDFELSDNK WLGDMFNMRE RWIPAYLRDV HMAGLMRTTS  480
RSESENHFFG KWTSPHLTLV EFLSHYDTAI EYQRYIERKN DHDSRYKTPK FKTGRPMEKE  540
ACKLYTRTLF FDVQDEILGS YKYCIGLSVV QSENMEKYAI RDTEFRNRKS GDNDFAVYQV  600
DFCKSEMIVQ CSCNRYESYG LLCRHAFYVL RMNNVKEFPR NYLKKRWLKN TKPSRSALPR  660
IIGASDLVRN EVLDMYEIFE STVDRLVHDL SKMHIYKDKL QELFNEAVID IPTVPKCDGK  720
ALSSTSNCFP TANKPV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.12e-92FAR1 family protein