PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc038579.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 736aa MW: 85369.1 Da PI: 8.092

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc038579.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	60	7.7e-19	54	168	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk..........................tekerrtraetrtgC 62 +fY +Y+k+ GF+ r+ ++k k t + f+Cs++g +e+++ k ++k+ r+r++ r+gC Cse_sc038579.1_g010.1 54 NFYVAYGKKGGFDCRRGGQYKAKGFSDATLKYFYCSRQGLNEDSNGKsgdsvtdndisgqseisddsnrfgevKKKQPRKRTSFRCGC 141 6***************************************999999*******************98888899999** PP FAR1 63 kaklkvkkekdgkwevtkleleHnHela 90 a+l+++k+ + +evtk+e HnH+l+ Cse_sc038579.1_g010.1 142 SASLTINKK-GNIYEVTKFEDGHNHPLV 168 ****9.9*************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 736 aa Download sequence
MAMFRFCADV ETVRIRDHVG FYVCGKDGTR TWYPDCLEKP IEGCQFISID QAYNFYVAYG 60 KKGGFDCRRG GQYKAKGFSD ATLKYFYCSR QGLNEDSNGK SGDSVTDNDI SGQSEISDDS 120 NRFGEVKKKQ PRKRTSFRCG CSASLTINKK GNIYEVTKFE DGHNHPLVAE KDMIFLKNSR 180 KMGYTKQHFL YQVSNANFGP AVGFRLMKQV YGGFDRVGTT VIDCKNQKKK ISVFIGDRDA 240 QMAVEKLLSR KLHSPSFYVN YYKGDDDKLV GLFWADEEAI KDYASFGDIV SFDATFRSNK 300 YEMVFVPFTG INHHNRCLTF ASGLLADESA GAYIWLLEQF KEAFGKEPEV VITDQDPSMK 360 IAIEECFPNT RHRLCMWHIM QKLTTKVGTA LCNRTDFKQR ICDIVGTALC NRTDFKQRIC 420 DIVWTDQILP EEFETEWDRM INDFELSDNK WLGDMFNMRE RWIPAYLRDV HMAGLMRTTS 480 RSESENHFFG KWTSPHLTLV EFLSHYDTAI EYQRYIERKN DHDSRYKTPK FKTGRPMEKE 540 ACKLYTRTLF FDVQDEILGS YKYCIGLSVV QSENMEKYAI RDTEFRNRKS GDNDFAVYQV 600 DFCKSEMIVQ CSCNRYESYG LLCRHAFYVL RMNNVKEFPR NYLKKRWLKN TKPSRSALPR 660 IIGASDLVRN EVLDMYEIFE STVDRLVHDL SKMHIYKDKL QELFNEAVID IPTVPKCDGK 720 ALSSTSNCFP TANKPV

Sequence ? help Back to Top

Protein Sequence Length: 736 aa Download sequence

MAMFRFCADV ETVRIRDHVG FYVCGKDGTR TWYPDCLEKP IEGCQFISID QAYNFYVAYG  60
KKGGFDCRRG GQYKAKGFSD ATLKYFYCSR QGLNEDSNGK SGDSVTDNDI SGQSEISDDS  120
NRFGEVKKKQ PRKRTSFRCG CSASLTINKK GNIYEVTKFE DGHNHPLVAE KDMIFLKNSR  180
KMGYTKQHFL YQVSNANFGP AVGFRLMKQV YGGFDRVGTT VIDCKNQKKK ISVFIGDRDA  240
QMAVEKLLSR KLHSPSFYVN YYKGDDDKLV GLFWADEEAI KDYASFGDIV SFDATFRSNK  300
YEMVFVPFTG INHHNRCLTF ASGLLADESA GAYIWLLEQF KEAFGKEPEV VITDQDPSMK  360
IAIEECFPNT RHRLCMWHIM QKLTTKVGTA LCNRTDFKQR ICDIVGTALC NRTDFKQRIC  420
DIVWTDQILP EEFETEWDRM INDFELSDNK WLGDMFNMRE RWIPAYLRDV HMAGLMRTTS  480
RSESENHFFG KWTSPHLTLV EFLSHYDTAI EYQRYIERKN DHDSRYKTPK FKTGRPMEKE  540
ACKLYTRTLF FDVQDEILGS YKYCIGLSVV QSENMEKYAI RDTEFRNRKS GDNDFAVYQV  600
DFCKSEMIVQ CSCNRYESYG LLCRHAFYVL RMNNVKEFPR NYLKKRWLKN TKPSRSALPR  660
IIGASDLVRN EVLDMYEIFE STVDRLVHDL SKMHIYKDKL QELFNEAVID IPTVPKCDGK  720
ALSSTSNCFP TANKPV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	2e-92	FAR1 family protein