PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc038408.1_g010.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | FAR1 | ||||||||
Protein Properties | Length: 197aa MW: 22545.2 Da PI: 10.0945 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 42.5 | 2.1e-13 | 2 | 93 | 5 | 90 |
FAR1 5 eYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk......tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnH 87 +YA+++GF vrks +k+ r+g ++++ +v ++eg ++ + + +ek++r+++ + +gCka ++ ++ + k+++t +++ HnH Cse_sc038408.1_g010.1 2 KYASKAGFVVRKSCQKRL-RSGIVKQKYLVYNREGCPKGIHVDtldlenSEKQKRSSNLHIIGCKALVMFELIPgSTKYKLTVFDSIHNH 90 7***********998887.8888*************999888789998889999999999**************9*************** PP FAR1 88 ela 90 el Cse_sc038408.1_g010.1 91 ELE 93 *96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 197 aa Download sequence |
MKYASKAGFV VRKSCQKRLR SGIVKQKYLV YNREGCPKGI HVDTLDLENS EKQKRSSNLH 60 IIGCKALVMF ELIPGSTKYK LTVFDSIHNH ELERKEYKHL SKNERQLTYA KQLFIVKAAS 120 VNIGATRAHH LLTGLKGSYL LVHGTTVDFK NFFRSVNCYI GDSDAQMLIA KMENRKKHVP 180 DFSFDYLVEN AELSAIF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38180.1 | 2e-06 | FAR1 family protein |