PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc038359.1_g010.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | NF-YC | ||||||||
Protein Properties | Length: 114aa MW: 13009.1 Da PI: 4.6814 | ||||||||
Description | NF-YC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YC | 106.5 | 1.6e-33 | 1 | 71 | 30 | 102 |
NF-YC 30 lkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdivprdelk 102 +kad+dv+misaea +++ +ace+fileltlrsw+h+ee rrtl+++di+ a+trt+ifdflvdivpr+++k Cse_sc038359.1_g010.1 1 MKADKDVRMISAEAAIVFERACEMFILELTLRSWNHTEE--RRTLQRNDIDVAITRTEIFDFLVDIVPRKDIK 71 9************************************97..99**************************9875 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 114 aa Download sequence |
MKADKDVRMI SAEAAIVFER ACEMFILELT LRSWNHTEER RTLQRNDIDV AITRTEIFDF 60 LVDIVPRKDI KEVMTSMPTS GSPGMISNKP LMDPDLYTQQ APPSMGPAMW PQPP |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 40 | 46 | RRTLQRN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G54830.3 | 4e-41 | NF-YC family protein |