PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc038251.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family ZF-HD
Protein Properties Length: 322aa    MW: 36310.6 Da    PI: 9.6434
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc038251.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer987.4e-31106162360
            ZF-HD_dimer   3 kvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRreveee 60 
                             vrY+eClkNh a++G+h++DGCgEfmp  ge+ t++alkCaAC+CHR+FHRreve e
  Cse_sc038251.1_g010.1 106 VVRYRECLKNHGANMGTHVLDGCGEFMPG-GEDDTPEALKCAACECHRSFHRREVEGE 162
                            689*************************9.8889********************9875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 322 aa     Download sequence    
MGTRERNSTN YNNPAQSNQD SSPRLSTAAT LISSPTSNTR RNETQDHPHL HLHHGNHHHG  60
FKLQKEQLEA QRSRRNQNPD SDPVRIVSQT PPPPPSTTAR AVAAVVVRYR ECLKNHGANM  120
GTHVLDGCGE FMPGGEDDTP EALKCAACEC HRSFHRREVE GESQSGYHTQ HMASRIPLTH  180
NPPPQAAPVP TPPAPSSQQQ HHRYHHPMPP IMMAFGGANG TPAESSSEDL NIFRTYAGVQ  240
LMAQTSKKRF RTKFTEEQKE KMHDFAERIG WKMQKQDEQE VLQFCNEVGL KRQVFKVWMH  300
NNKQATKKKQ LRKDIQLPAA AS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G18350.13e-64ZF-HD family protein