PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Cse_sc038149.1_g020.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
|
||||||||
Family | B3 | ||||||||
Protein Properties | Length: 177aa MW: 20105.8 Da PI: 10.2055 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 57.6 | 2.2e-18 | 21 | 99 | 11 | 95 |
HHTT-EE--HHH.HTT....---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS B3 11 lksgrlvlpkkfaeeh....ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 +l+lp f +++ ++kk + l+ ++sg +W+vk+ +k gry+l++GW +F k+n+L+ gDf+vF +r++ ++ Cse_sc038149.1_g020.1 21 V---NLSLPDAFGKKYlekcNSKK-QRLGLKTSNQSGVKWSVKY--SKINGRYYLRDGWLKFMKDNNLQMGDFLVFW--RRTKL--TFN 99 3...388*****999999974333.445799999**********..******************************9..33444..333 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 177 aa Download sequence |
MKYKNGNEDS FFKIILQDSA VNLSLPDAFG KKYLEKCNSK KQRLGLKTSN QSGVKWSVKY 60 SKINGRYYLR DGWLKFMKDN NLQMGDFLVF WRRTKLTFNV FVYAPNGCLK QPTSSSSSSS 120 SGSDDHTAVG SGDDGKKVFV KEESSDDDGL SKNVEKFTRR VVKQNSKTIM VVINFDF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G00260.1 | 2e-10 | B3 family protein |