PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc037939.1_g020.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family G2-like
Protein Properties Length: 284aa    MW: 32190 Da    PI: 7.2976
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc037939.1_g020.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like108.43.8e-3456110155
                G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                            kprlrWt eLHerFv+av+qLGG++kAtPkti+++m+vkgLtl+h+kSHLQk+Rl
  Cse_sc037939.1_g020.1  56 KPRLRWTVELHERFVDAVNQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQKFRL 110
                            79****************************************************8 PP
2Myb_DNA-binding72.37.1e-2358109148
                            TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
        Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 
                            r+rWT e++e++vdav+qlGg+   t+ktI+r mg kg+tl+++ks++qk++
  Cse_sc037939.1_g020.1  58 RLRWTVELHERFVDAVNQLGGPdkaTPKTIMRVMGvKGLTLYHLKSHLQKFR 109
                            89************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 284 aa     Download sequence    
MFHSSTTNID LRDHNHNHNH YERSVMSNVA GNINRASAGD AVQGDHSGLV LTTDPKPRLR  60
WTVELHERFV DAVNQLGGPD KATPKTIMRV MGVKGLTLYH LKSHLQKFRL GKQPHKEFND  120
HFMKDRERVS AMEVQRNGSA SSSGPLGRSM NEMQIEVQRR LHEQLEVQRH LQLRIEAHGK  180
YMQTILEKAC QTLSGDQSRD ATAGYDSKTK VGSGSVTHMD MNMSQMMMWP DDNDHHHIEV  240
PCSNDTKGDG YDLDSGATEH SYDTKPLLLP RSRDIDHHHH IGLV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G79430.23e-90G2-like family protein