PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc037537.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

NAC

Protein Properties

Length: 466aa MW: 53207.8 Da PI: 4.8674

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc037537.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	99	6.6e-31	15	142	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvkaeekewyfFskrdkkyatgkrknratk.sgyWka 85 l pG+rF Ptd el+v+yLk+k+++ k + + ev+iy++ P +L + ++++ e++wyf ++r++k+++g+r+nr+tk g+Wka Cse_sc037537.1_g010.1 15 LEPGYRFCPTDVELIVYYLKPKIDTGKRHPNCRYYEVNIYDYGPDELTAkpEYRSCENKWYFLTPRERKHPNGNRPNRKTKpGGTWKA 102 579*******************9997774569*********84356777889****************877699 PP NAM 86 tgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 + + k+ + +++vg k+ L + ++kg+kt W+mhey+ Cse_sc037537.1_g010.1 103 SQTGKPQRDDMNRVVGSKTCLFYI---DEKGNKTAWLMHEYTT 142 999999999899999999999888...78899*******85 PP

Sequence ? help Back to Top
Protein Sequence Length: 466 aa Download sequence
MAYNNQEQHD YADSLEPGYR FCPTDVELIV YYLKPKIDTG KRHPNCRYYE VNIYDYGPDE 60 LTAKPEYRSC ENKWYFLTPR ERKHPNGNRP NRKTKPGGTW KASQTGKPQR DDMNRVVGSK 120 TCLFYIDEKG NKTAWLMHEY TTDNPNIPKG SQEQKENNNM LTPWVLCKIY KKETKPAYKN 180 IRNQEDTLEE QNQQLQDEPS PKRRRLSLNQ ESNQSNGPEH IPVQETNYHL ETDVQIVEPV 240 QFMITSNQQS DLNIVHVGAS QTFPTTAMNT SPNSVTMQPM AMFCGSKLTQ PAVQGPPQAF 300 ATDQVQQSVG NSTLVYYQNQ SRPTSTNGFQ FSCGASSSSS KVSPPAILEP GDNDMAPVPH 360 EEDIYDNLTP LDDFMISPAH ALAFQMDTSS NPMTMQQMGS SQTSSDEVLQ QHVQNSYDDT 420 QSFCDQSMIV HKNDYSYLDK LISEDAPSYH PSEYHSFDWL DSIIFE

Sequence ? help Back to Top

Protein Sequence Length: 466 aa Download sequence

MAYNNQEQHD YADSLEPGYR FCPTDVELIV YYLKPKIDTG KRHPNCRYYE VNIYDYGPDE  60
LTAKPEYRSC ENKWYFLTPR ERKHPNGNRP NRKTKPGGTW KASQTGKPQR DDMNRVVGSK  120
TCLFYIDEKG NKTAWLMHEY TTDNPNIPKG SQEQKENNNM LTPWVLCKIY KKETKPAYKN  180
IRNQEDTLEE QNQQLQDEPS PKRRRLSLNQ ESNQSNGPEH IPVQETNYHL ETDVQIVEPV  240
QFMITSNQQS DLNIVHVGAS QTFPTTAMNT SPNSVTMQPM AMFCGSKLTQ PAVQGPPQAF  300
ATDQVQQSVG NSTLVYYQNQ SRPTSTNGFQ FSCGASSSSS KVSPPAILEP GDNDMAPVPH  360
EEDIYDNLTP LDDFMISPAH ALAFQMDTSS NPMTMQQMGS SQTSSDEVLQ QHVQNSYDDT  420
QSFCDQSMIV HKNDYSYLDK LISEDAPSYH PSEYHSFDWL DSIIFE

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	202	206	KRRRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G61110.1	2e-33	NAC family protein