PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc037163.1_g020.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family NAC
Protein Properties Length: 318aa    MW: 36637.5 Da    PI: 4.3343
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc037163.1_g020.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM175.91.1e-5461351128
                    NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkat 86 
                            lppGfrFhPtdeelv++yLk+k++g+++el ++i+evd+yk+ePw+L  k  + +++ ewyfF +rd+ky++g r+nrat++gyWk+t
  Cse_sc037163.1_g020.1   6 LPPGFRFHPTDEELVNYYLKRKIHGQEIEL-DIIPEVDLYKCEPWELAeKsFLPSRDPEWYFFGPRDRKYPNGFRTNRATRAGYWKST 92 
                            79****************************.99**************84335556888****************************** PP

                    NAM  87 gkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
                            gkd++v+s+ +++++g+kktLv+y+grap+g +tdWvmheyrl
  Cse_sc037163.1_g020.1  93 GKDRRVTSQgHNRNIGMKKTLVYYRGRAPQGIRTDWVMHEYRL 135
                            ********977788***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 318 aa     Download sequence    
MAPVGLPPGF RFHPTDEELV NYYLKRKIHG QEIELDIIPE VDLYKCEPWE LAEKSFLPSR  60
DPEWYFFGPR DRKYPNGFRT NRATRAGYWK STGKDRRVTS QGHNRNIGMK KTLVYYRGRA  120
PQGIRTDWVM HEYRLDDKDC PDTFGVQDSY ALCRVFKKNG ICVDLDDNGH TSMIVSQYSP  180
TITNCNDYES MSPDVPVASS SCIEEDDKDD SWMQFITDDP WCSPSVDAGE EVPQLHRPDQ  240
RDLEIEAQER QIKELERLLA VVRLDAHRDI NREVDGVSNS DDGEDEGLNT DSVSNEEEDV  300
NTWGLIIVIE IMASDQDD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G17730.11e-127NAC family protein