PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc037071.1_g010.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | MYB | ||||||||
Protein Properties | Length: 234aa MW: 27016.3 Da PI: 7.1125 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 56 | 9.4e-18 | 16 | 63 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+ Ed+ll+++v+++G g+W+++a + g++R +k+c++rw +yl Cse_sc037071.1_g010.1 16 KGPWTPAEDKLLAEYVALHGEGRWSSVAGCTGLKRNGKSCRLRWVNYL 63 79******************************9*************97 PP | |||||||
2 | Myb_DNA-binding | 50.1 | 6.3e-16 | 70 | 113 | 2 | 47 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 g +++E+ +++++++++G++ W+tIar+++ gRt++++k++w+++ Cse_sc037071.1_g010.1 70 GQLSPQEEGIIIELHALWGNK-WSTIARYLP-GRTDNEIKNYWRTH 113 6779*****************.*********.************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 234 aa Download sequence |
MDGMMGWRMA DQGWRKGPWT PAEDKLLAEY VALHGEGRWS SVAGCTGLKR NGKSCRLRWV 60 NYLRPGLKKG QLSPQEEGII IELHALWGNK WSTIARYLPG RTDNEIKNYW RTHFKNSGKP 120 LQHEKKRKYE THLSYNQEQQ VYRTMNTASS SESEENYGGM ITEPSQSTLQ ETTAVAWPEA 180 TMEQQQQNPC VMAQDVARWW DTVSEDGLWS GFLWNQELVH PNQAVIEQSF SPCY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G30210.1 | 1e-65 | MYB family protein |