PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc036711.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family FAR1
Protein Properties Length: 364aa    MW: 41763.8 Da    PI: 8.5926
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc036711.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR138.73.3e-126484789
                   FAR1 47 ktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHel 89
                           + ++e ++r  +rtgCka ++v+++++g+w+v+k++ eHnH++
  Cse_sc036711.1_g010.1  6 QLRDEVKRRCIKRTGCKALMQVTLSSQGEWVVDKFSDEHNHPF 48
                           345788999********************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 364 aa     Download sequence    
MNDKRQLRDE VKRRCIKRTG CKALMQVTLS SQGEWVVDKF SDEHNHPFDS PSKVIKQRSY  60
SIFHRSSECK DVVTLLSKAG MKPSEITKVV NAFRGGEEDQ LTRVQCSAII SEERKCNLGK  120
ECHGIIMHFK EKAEVDKDFY FAMDINEDGV LQNVFWADGR SRPSYFQFGD VVVFYVTYRT  180
NKFSFPFAPF VGVNHHGQSI LLGVALLENE TEKTFKWLFE QFLKCMHECP PIALITDQDL  240
AMGKAISKVF PNTKHRSVEK DQDFRTLNSK PTLYSNHPIE EMAATCYTRN IYAIFQKEWK  300
ASFDCGQQIL STDGAKVIYR VGFLKGNKEN WKTVKYNVAS DIFVTFLVRG LRLLESCANI  360
SSTS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.13e-55FAR1 family protein