PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc036460.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

NAC

Protein Properties

Length: 503aa MW: 56738.8 Da PI: 8.2385

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc036460.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	67.2	4.6e-21	245	307	67	128
NAM 67 kyatgkrknratksgyWkatgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128 k+ ++ r+nr+t +g+Wkatg+d++++s+ +++ +glkk+Lvfyk ra kg ktdW+mhe+rl Cse_sc036460.1_g010.1 245 KTGNSARPNRVTGAGFWKATGTDRPIYSSdGSRCIGLKKSLVFYKVRAAKGFKTDWMMHEFRL 307 456789********************966777*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 503 aa Download sequence
MDPIKLRQTL SQNAELERIY LTPEDPTAHV HRKKAGGFRG QEVNGKNRFN IYPREKEVWV 60 INNKDETKCT VSQVDVGDCD IVEVLENNGD AINVLSLKCV PGYKSVFRAL EIQKSKEKKV 120 LEIPLADSNR FYCRVLAFLL TVEHDGSLRG SWELDFTEFP GDARRAFEIC RRAAELMDYR 180 LAQTVSCLCK SNGITFPGWD TLLRIGCKLG ESRIVLCESG ASHRLQKLQL NFPRLVPSIL 240 HIVCKTGNSA RPNRVTGAGF WKATGTDRPI YSSDGSRCIG LKKSLVFYKV RAAKGFKTDW 300 MMHEFRLPSM VDRNGQAKRT QDTNNLFHEP TYNNRVDASL LFNIPSTIFG DFGKGLDNMT 360 SEEQHNFSDS CFSFASIPEM QEQVQDRTND MMFQTPTNVK MANNCISPDV EKLEAEIPEG 420 GVLLLENVRF YKEEEKNDPV FAKKLASLAD LYFNDAFGTA HRAHASTEGV AKHFKPSVAR 480 FLMQKIQAKR EGKACQCVLC SGS

Sequence ? help Back to Top

Protein Sequence Length: 503 aa Download sequence

MDPIKLRQTL SQNAELERIY LTPEDPTAHV HRKKAGGFRG QEVNGKNRFN IYPREKEVWV  60
INNKDETKCT VSQVDVGDCD IVEVLENNGD AINVLSLKCV PGYKSVFRAL EIQKSKEKKV  120
LEIPLADSNR FYCRVLAFLL TVEHDGSLRG SWELDFTEFP GDARRAFEIC RRAAELMDYR  180
LAQTVSCLCK SNGITFPGWD TLLRIGCKLG ESRIVLCESG ASHRLQKLQL NFPRLVPSIL  240
HIVCKTGNSA RPNRVTGAGF WKATGTDRPI YSSDGSRCIG LKKSLVFYKV RAAKGFKTDW  300
MMHEFRLPSM VDRNGQAKRT QDTNNLFHEP TYNNRVDASL LFNIPSTIFG DFGKGLDNMT  360
SEEQHNFSDS CFSFASIPEM QEQVQDRTND MMFQTPTNVK MANNCISPDV EKLEAEIPEG  420
GVLLLENVRF YKEEEKNDPV FAKKLASLAD LYFNDAFGTA HRAHASTEGV AKHFKPSVAR  480
FLMQKIQAKR EGKACQCVLC SGS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G39820.1	2e-33	NAC family protein