PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc036024.1_g020.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 404aa MW: 47424.9 Da PI: 7.0355

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc036024.1_g020.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	80.2	3.6e-25	77	166	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHe 88 fYn+YA GF +r++ +k+k+++e++++ +vC+keg+++++ ++ +e ++++r rtgCka+l+++k+kdgkw+ + ++ HnH+ Cse_sc036024.1_g020.1 77 FYNQYAFLHGFGIRIHWDYKNKTTNEVYRKLYVCNKEGFKRHKGNSsNEVSKKRRRDVRTGCKAELRISKTKDGKWYADIFNDTHNHD 164 ***************************************9998856677889999****************************9 PP FAR1 89 la 90 l+ Cse_sc036024.1_g020.1 165 LT 166 95 PP

Sequence ? help Back to Top
Protein Sequence Length: 404 aa Download sequence
MQMQTHLIED IDKNGYLVDH HNEEYDCERP NYDEVNNDDI WEKPNEDRVN IGCDEIEITD 60 DNILGKIFNT PDDAYTFYNQ YAFLHGFGIR IHWDYKNKTT NEVYRKLYVC NKEGFKRHKG 120 NSSNEVSKKR RRDVRTGCKA ELRISKTKDG KWYADIFNDT HNHDLTLTPT KVMKHRSHNK 180 FHRSMACKSL MLELGKSGEC YTKKIFEVFQ KEWIEATRNL THETKSKSEE KSSYWVGQVN 240 VDKKHWRVVN FCFLDKLDLT CSCAMFETYG ILCTKLVMLI SESRKQIVKM RYKVGNANIG 300 IEETNCENEV SALALWYVQA NSTKAIEQAR DAPSEIKRLN NFLVEFLEDQ MIRKKPTEIE 360 NACKDARVGI SQVDMMPQIT VDAYVVIQFD HVSIKADMVK EWHM

Sequence ? help Back to Top

Protein Sequence Length: 404 aa Download sequence

MQMQTHLIED IDKNGYLVDH HNEEYDCERP NYDEVNNDDI WEKPNEDRVN IGCDEIEITD  60
DNILGKIFNT PDDAYTFYNQ YAFLHGFGIR IHWDYKNKTT NEVYRKLYVC NKEGFKRHKG  120
NSSNEVSKKR RRDVRTGCKA ELRISKTKDG KWYADIFNDT HNHDLTLTPT KVMKHRSHNK  180
FHRSMACKSL MLELGKSGEC YTKKIFEVFQ KEWIEATRNL THETKSKSEE KSSYWVGQVN  240
VDKKHWRVVN FCFLDKLDLT CSCAMFETYG ILCTKLVMLI SESRKQIVKM RYKVGNANIG  300
IEETNCENEV SALALWYVQA NSTKAIEQAR DAPSEIKRLN NFLVEFLEDQ MIRKKPTEIE  360
NACKDARVGI SQVDMMPQIT VDAYVVIQFD HVSIKADMVK EWHM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G80010.1	5e-14	FAR1 family protein