PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc035866.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

G2-like

Protein Properties

Length: 459aa MW: 51287.9 Da PI: 4.4788

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc035866.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	83.8	1.9e-26	102	155	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k ++ Wt +LH++F++av++L G ++A+P++ile+m+v+gLt++hv+SHLQkYR+ Cse_sc035866.1_g010.1 102 KSKIMWTDDLHNKFLKAVHKL-GLDNAVPRKILEMMEVEGLTRDHVASHLQKYRI 155 5799***************.******************************6 PP
2	Myb_DNA-binding	40.3	7.3e-13	107	154	4	48
S-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 4 WTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 WT +++ ++++av++lG + +++I ++m +g+t+ ++ s++qky+ Cse_sc035866.1_g010.1 107 WTDDLHNKFLKAVHKLGLDnaVPRKILEMMEvEGLTRDHVASHLQKYR 154 *****************9*************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 459 aa Download sequence
MFLISLIPNL IVMPANDEEI IHMGFEDEEY LFMEKAQNVD DVSHVSHHTY GNNENTFGED 60 VNLSSKGTPM GSRLLEDQEE NSSLKIPPKG SHSADVRSCF TKSKIMWTDD LHNKFLKAVH 120 KLGLDNAVPR KILEMMEVEG LTRDHVASHL QKYRILSKKI DDANYGFQIA SKPILLESSM 180 YHSGHWKSSS PIVTEQTKEQ INWQSYKEMH AIPVLDTSSS YVPFLKDPGF SAITSCEVAP 240 SGALPNQGSM QTTTNNLNGQ RNLIDHANTL DVADSSNIGL VPNPNGFVYD YSSGSTTVYP 300 SSIIEINSSN GVHSNNDLAM SIIGNPSDLT FMQDPYRFEG NNSTQLDFVQ TGVLYDSMTT 360 IAEDDLIFSD ADIASLLAYA NNDGEYAKIS NNLQLNHPNQ YVNGQNFSNN CSFDSNHNKD 420 HVNEHQTLYG YLCGFDPNFD MTDEQLMEPI WSPELLRTI

Sequence ? help Back to Top

Protein Sequence Length: 459 aa Download sequence

MFLISLIPNL IVMPANDEEI IHMGFEDEEY LFMEKAQNVD DVSHVSHHTY GNNENTFGED  60
VNLSSKGTPM GSRLLEDQEE NSSLKIPPKG SHSADVRSCF TKSKIMWTDD LHNKFLKAVH  120
KLGLDNAVPR KILEMMEVEG LTRDHVASHL QKYRILSKKI DDANYGFQIA SKPILLESSM  180
YHSGHWKSSS PIVTEQTKEQ INWQSYKEMH AIPVLDTSSS YVPFLKDPGF SAITSCEVAP  240
SGALPNQGSM QTTTNNLNGQ RNLIDHANTL DVADSSNIGL VPNPNGFVYD YSSGSTTVYP  300
SSIIEINSSN GVHSNNDLAM SIIGNPSDLT FMQDPYRFEG NNSTQLDFVQ TGVLYDSMTT  360
IAEDDLIFSD ADIASLLAYA NNDGEYAKIS NNLQLNHPNQ YVNGQNFSNN CSFDSNHNKD  420
HVNEHQTLYG YLCGFDPNFD MTDEQLMEPI WSPELLRTI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G58080.1	3e-21	ARR-B family protein