PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc035745.1_g020.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family MYB
Protein Properties Length: 281aa    MW: 31843.8 Da    PI: 8.3599
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc035745.1_g020.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding35.91.8e-112169147
                           TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHHH CS
        Myb_DNA-binding  1 rgrWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqky 47
                           + +WT+eE +++ da +++  +   +W+ +a++++ g++ +++ + ++k+
  Cse_sc035745.1_g020.1 21 KTKWTQEENKQFEDALALYDREtpdRWHNVAKMIP-GKSVNDVMNQYRKL 69
                           579*****************88*************.************97 PP
2Myb_DNA-binding45.61.6e-14126170347
                            SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
        Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                            +WT+eE+ +++ + k++G+g+W+ I+r + ++Rt+ q+ s+ qky
  Cse_sc035745.1_g020.1 126 PWTEEEHRQFLLGLKKYGKGDWRNISRNFVTTRTPTQVASHAQKY 170
                            7*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 281 aa     Download sequence    
MNQGTESYFI GSTLFFEGTS KTKWTQEENK QFEDALALYD RETPDRWHNV AKMIPGKSVN  60
DVMNQYRKLE EDISDIEAGV LVVPGYNMRS DHATLDWVAN NQCYSPGGMK CGSNKLPDHE  120
KKKGIPWTEE EHRQFLLGLK KYGKGDWRNI SRNFVTTRTP TQVASHAQKY FIRQLSGGKD  180
KRRSSIHDIT TVHLNDTTRK TQLPENDTCQ KPGECTTMVT IPQQQHYMVK AVYQWSPSNQ  240
QVAANMAFNV PNSSLMMAPL HGSSSYGPQC GHLGTVFQGN C
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38090.15e-91MYB family protein