PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc035389.1_g020.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

GeBP

Protein Properties

Length: 316aa MW: 35361.4 Da PI: 4.8141

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc035389.1_g020.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	105	5.9e-33	58	158	2	97
DUF573 2 lfqrlwseeDeivlLqGlidfkaktgk.....spsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskeh 84 lfq+lw++eDei lLqG d +++g+ + + d++afye +k++++++++k+qlveK+rrLKkK+++ v+k +sgke +f+++h Cse_sc035389.1_g020.1 58 LFQKLWTDEDEIELLQGYYDHITTRGMmtsssHHHPDTTAFYEVIKGKLQLEFNKNQLVEKLRRLKKKYRNVVSKLASGKEYVFKSPH 145 79**********************9987533445************************************************ PP DUF573 85 dqkifelskkiWg 97 dq +f++s +iW+ Cse_sc035389.1_g020.1 146 DQAAFDISCRIWN 158 **********8 PP

Sequence ? help Back to Top
Protein Sequence Length: 316 aa Download sequence
MASDNDNGDQ FLNDDEEEDI DLINDDEEDS TSVTIAVAGT PTVTTTTVTP STIDSRRLFQ 60 KLWTDEDEIE LLQGYYDHIT TRGMMTSSSH HHPDTTAFYE VIKGKLQLEF NKNQLVEKLR 120 RLKKKYRNVV SKLASGKEYV FKSPHDQAAF DISCRIWNND GEVQNHNLNG NGNGNGNGNE 180 IGDMEKKVRS RKRARSCGVK IEEGYVQPLQ QFGPGLGVGM GNEGGVSRNV NANVVEETVK 240 SCLLPLFKEL VNNSSDVGSR GVGLGGMNLD SVGIGDMSDE KWRKQHILEL EVYLKRLELM 300 QDQVKSRLDE LRSMES

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G28040.1	2e-68	GeBP family protein