PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc035290.1_g010.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | bHLH | ||||||||
Protein Properties | Length: 160aa MW: 18240 Da PI: 9.8983 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 26.4 | 1.3e-08 | 13 | 58 | 5 | 53 |
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIks 53 +++E++RRd++++ +++L +ll + + +++ LekA++ Ik+ Cse_sc035290.1_g010.1 13 QSAMEKQRRDQMKNLYSKLASLLCLQ---SYERMPLLGLLEKATDSIKQ 58 589**********************9...99****************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 160 aa Download sequence |
MKRPSGSSSH RQQSAMEKQR RDQMKNLYSK LASLLCLQSY ERMPLLGLLE KATDSIKQWK 60 EMVEQLTARK KEIENELRGV MSNEINLHVV QVSEMDSNLE VNLIIKASNK RIELLRVLSI 120 IEQGGAEIIN YSLSNGTKHT LHHSCSGTPN PKNVSYFTKN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G10585.1 | 6e-13 | bHLH family protein |