PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc035274.1_g020.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | C2H2 | ||||||||
Protein Properties | Length: 144aa MW: 16923.7 Da PI: 9.931 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 13 | 0.0003 | 19 | 40 | 1 | 22 |
EEETTTTEEESSHHHHHHHHHH CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirt 22 y+C+ C+k+F++ L H+ Cse_sc035274.1_g020.1 19 YECKTCKKRFKSFQALGGHQGI 40 99*********99999888765 PP | |||||||
2 | zf-C2H2 | 17.8 | 9.5e-06 | 66 | 88 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ C+k+F + +L H+r+H Cse_sc035274.1_g020.1 66 HRCNMCTKVFETGQMLGGHMRKH 88 79********************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 144 aa Download sequence |
MVIFKHLEEN SGFQETDGYE CKTCKKRFKS FQALGGHQGI HNKRIKPNED DVMCMLSLNI 60 IPTGLHRCNM CTKVFETGQM LGGHMRKHRD EKALNAIKKQ ELWRQKSDSG LTMAELERRK 120 AEVDERMRVR RELIMAAKEL RLWF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G46080.1 | 2e-19 | C2H2 family protein |