PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc035075.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

NAC

Protein Properties

Length: 764aa MW: 88136.5 Da PI: 6.5502

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc035075.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	138.8	3.3e-43	361	480	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgk 88 + pGfrFhPtdeelv ++k++++ + ik++diyk++PwdLpk ++++ekewyfF++rd+ky+++ r+n +t +g+Wkatg+ Cse_sc035075.1_g010.1 361 MLPGFRFHPTDEELV--------QEKPFSI-DLIKQLDIYKYDPWDLPKLATTGEKEWYFFCRRDRKYRNSARPNSVTGAGFWKATGT 439 579**********........7899999.89***********8888999***************************** PP NAM 89 dkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128 d++++s+ +++ +glkk+Lvfykgra kg +tdW+mhe+rl Cse_sc035075.1_g010.1 440 DRPIYSSdGSRCIGLKKSLVFYKGRAAKGFRTDWMMHEFRL 480 **966777*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 764 aa Download sequence
LGKYRKWTAR PEAYHFPDHA FLTFETRPVA QRFSWTQPET DTWPTTYDTT EKEIEETQLT 60 DKDRWKGLAY DIFDDQHDIT RGKGMVDSHF QAPQDVGTHF AVMSSYEYIS TGLRTYNLDN 120 NMDGFYIAPA FMDKLVVHIT KNFMTLPNIK EADMHGVCYL SRIPPRMDPI KLHQTLSQYA 180 ELERIYLTPE DPTAHVHRKK AGGFRGQEVN GKNRFNIYPR EKEVWVLNNK DETKCTVSHV 240 DVGDCDIVEV LENNGDTIKC RVPAFLLTVE HDGCLRGSWE LDFAEFPAVA GDARRALEIC 300 LRAAELMDYR VKNSTSLPKT VSTNFFMSLY KQWNNISRMG HAPENWERSE TNGDQKMEEI 360 MLPGFRFHPT DEELVQEKPF SIDLIKQLDI YKYDPWDLPK LATTGEKEWY FFCRRDRKYR 420 NSARPNSVTG AGFWKATGTD RPIYSSDGSR CIGLKKSLVF YKGRAAKGFR TDWMMHEFRL 480 PSMVDRNGQA RRFLEKTIPP NEQWAICRIF KKVNSSAQRD FSHSWVSPII PKTPSPEPCQ 540 YDNTQDTNNL FHEPTYNTGV DASLLFNIPS TIFGDFGKGL DNMTSEEQHN FSDSCFSFAS 600 IPEMQEQVQD HTNDMMFQTP TNGRPKGVTQ KFSLKPLVSR IFELLGCEVK MADNFISPDV 660 EKLEAEIPEG GVLLLENVRF YKEEEKNDPV FAKKLASLAD LYFNDDFGTA HRAHASTEGV 720 AKHFKPSVAR FLMQKALFMH SDLYKRKERE KRVNAYSAQA LEGI

Sequence ? help Back to Top

Protein Sequence Length: 764 aa Download sequence

LGKYRKWTAR PEAYHFPDHA FLTFETRPVA QRFSWTQPET DTWPTTYDTT EKEIEETQLT  60
DKDRWKGLAY DIFDDQHDIT RGKGMVDSHF QAPQDVGTHF AVMSSYEYIS TGLRTYNLDN  120
NMDGFYIAPA FMDKLVVHIT KNFMTLPNIK EADMHGVCYL SRIPPRMDPI KLHQTLSQYA  180
ELERIYLTPE DPTAHVHRKK AGGFRGQEVN GKNRFNIYPR EKEVWVLNNK DETKCTVSHV  240
DVGDCDIVEV LENNGDTIKC RVPAFLLTVE HDGCLRGSWE LDFAEFPAVA GDARRALEIC  300
LRAAELMDYR VKNSTSLPKT VSTNFFMSLY KQWNNISRMG HAPENWERSE TNGDQKMEEI  360
MLPGFRFHPT DEELVQEKPF SIDLIKQLDI YKYDPWDLPK LATTGEKEWY FFCRRDRKYR  420
NSARPNSVTG AGFWKATGTD RPIYSSDGSR CIGLKKSLVF YKGRAAKGFR TDWMMHEFRL  480
PSMVDRNGQA RRFLEKTIPP NEQWAICRIF KKVNSSAQRD FSHSWVSPII PKTPSPEPCQ  540
YDNTQDTNNL FHEPTYNTGV DASLLFNIPS TIFGDFGKGL DNMTSEEQHN FSDSCFSFAS  600
IPEMQEQVQD HTNDMMFQTP TNGRPKGVTQ KFSLKPLVSR IFELLGCEVK MADNFISPDV  660
EKLEAEIPEG GVLLLENVRF YKEEEKNDPV FAKKLASLAD LYFNDDFGTA HRAHASTEGV  720
AKHFKPSVAR FLMQKALFMH SDLYKRKERE KRVNAYSAQA LEGI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G26870.1	5e-91	NAC family protein