PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc035047.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

bHLH

Protein Properties

Length: 337aa MW: 37942.2 Da PI: 6.6318

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc035047.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	26.4	1.2e-08	232	272	9	54
HHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS HLH 9 ErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 r+RR+ri +++ L++l+P + K++ a++L +A +Y+k L Cse_sc035047.1_g010.1 232 ARQRRERISDRIRALQKLVPGgN------KMDTASMLDEAANYLKFL 272 69****************955......**************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 337 aa Download sequence
MEDLSWERNI SFPWSNINHH QQQDIEETFI FGSENIFLNP IQDLRKPDPP TCSNPLPSSN 60 GSASQYWSQT TLAKGKTVIP ITTPTHADRV TSLESLNNLF SDKNSNVDTS LDGISVIFAD 120 YNNLCNKITN NISDGSSTSV TKDTDDCIVS QSSNERRLKR PRSDPGRPVS SNINFRQTSE 180 SDETDSEATA QMKEMIYRAA AFRPVSFAED EVAEKRRRKN VKISSDPQTV AARQRRERIS 240 DRIRALQKLV PGGNKMDTAS MLDEAANYLK FLRSQVKELE HLGQKYDFMS CGTTTNAQST 300 SQIMQNINPN VTLGVPFPMQ THFLLPHQQL YPNPPHT

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	214	220	EKRRRKN
2	233	238	RQRRER

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G21330.1	6e-43	bHLH family protein