PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc034802.1_g010.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | bHLH | ||||||||
Protein Properties | Length: 201aa MW: 22983.8 Da PI: 4.755 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 20.4 | 9.5e-07 | 50 | 74 | 7 | 30 |
HHHHHHHHHHHHHHHHHHCTSCC.C CS HLH 7 erErrRRdriNsafeeLrellPk.a 30 Er+RR+++N++++ Lr ++P+ + Cse_sc034802.1_g010.1 50 VSERNRRKKLNDRLFALRAVVPNiS 74 57********************955 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 201 aa Download sequence |
MENITDVNWE SILQTEDYSW GVLEETFSGC SDSTSQDGGQ SSSPASKNIV SERNRRKKLN 60 DRLFALRAVV PNISKMDAID YIQTLHEQER TILAELTELE SQKSEPENFD FNQETKFMSM 120 EKSKKIRVEQ AFDSSGSSSY PIEVQDTVLV SLKCNKRRDT IVKLCEVFES LKLKIVTANI 180 SSFSERLFNT LFIQLYITHA T |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 152 | 158 | LKCNKRR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G57150.3 | 2e-46 | bHLH family protein |