PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc034623.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family MYB
Protein Properties Length: 296aa    MW: 33491.4 Da    PI: 6.7891
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc034623.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding24.65.7e-083175345
                           SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHH CS
        Myb_DNA-binding  3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwq 45
                            WT+ E +l+ +a +++ ++   +W ++a++++ g+t  +++  + 
  Cse_sc034623.1_g010.1 31 VWTPYENKLFENALAKFDKDapdRWQRVAEMVP-GKTVTDVIRQYK 75
                           6********************************.******998886 PP
2Myb_DNA-binding47.15.3e-15151195347
                            SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
        Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                            +WT+eE++l++ + k++G+g+W+ I+r +  +Rt+ q+ s+ qky
  Cse_sc034623.1_g010.1 151 PWTEEEHKLFLLGLKKYGKGDWRNISRNFVVTRTPTQVASHAQKY 195
                            8*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 296 aa     Download sequence    
MKWESVMLSP SSYISNSSSW MMEDSIKSTT VWTPYENKLF ENALAKFDKD APDRWQRVAE  60
MVPGKTVTDV IRQYKELEDD VSNIEAGFYP KYEYNCSTTS NFTLEWGNGI GNDGFYSPTF  120
CAGEKRSSSA AALAAVAAGR PVEQERKKGV PWTEEEHKLF LLGLKKYGKG DWRNISRNFV  180
VTRTPTQVAS HAQKYFIRQL SGGKDKRRAS IHDITTVNIQ ENHTSPEYIR ATSPEQCKFE  240
WNQPNSETTI MAFNQTQGNN LFMCPKYGGN TFGGGGGLDE SYGEPANMVF QMHYPH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G58900.11e-75MYB_related family protein