PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc034547.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family FAR1
Protein Properties Length: 204aa    MW: 23574.7 Da    PI: 7.6332
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc034547.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR132.23.6e-1025108690
                   FAR1   6 YAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek..dgkwevtkleleHnHela 90 
                             A+++GF ++k+++k     g  ++ +++Cs++g++++e  + ++ +r++++ +t+C  kl  k  k  ++ w +    + HnH+++
  Cse_sc034547.1_g010.1  25 IAQSIGFLIVKARTKID--RGYKYSIEYKCSRHGTSAREGLE-DELQRQTSTAKTNCPFKLLAKYIKgqTNGWILRVKCERHNHDFV 108
                            5899*******998887..6667***************9999.888999999***********99988678898888889****986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 204 aa     Download sequence    
MSTSPFDTQE VFPDDDVLTN WVQTIAQSIG FLIVKARTKI DRGYKYSIEY KCSRHGTSAR  60
EGLEDELQRQ TSTAKTNCPF KLLAKYIKGQ TNGWILRVKC ERHNHDFVDS FHGFPQAMRL  120
KDHEFILVEQ LTKHKVAPRI ILSSLKESDP DNVSSIKIIG VGLGYSEDIW SNLRTLVREE  180
VNNNRELYRE MWGTWIEQIS HSLG