PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc034522.1_g030.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | FAR1 | ||||||||
Protein Properties | Length: 172aa MW: 20683.7 Da PI: 9.589 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 48.1 | 4e-15 | 3 | 70 | 28 | 90 |
FAR1 28 itkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.....dgkwevtkleleHnHela 90 +kr+f C +eg ++ + + +k++r+r ++r+gCka++++k+++ ++w+v +++ eHnH l Cse_sc034522.1_g030.1 3 KKKRDFFCHREGAPKVKVIDYSKKQRNRGSSRCGCKAHMRIKLKRineifPEEWQVVQFVAEHNHVLL 70 5789**************999*********************99885555689************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 172 aa Download sequence |
MEKKKRDFFC HREGAPKVKV IDYSKKQRNR GSSRCGCKAH MRIKLKRINE IFPEEWQVVQ 60 FVAEHNHVLL STQEVRFLPS YRCITKEDEN RILMLKEGGL SVRQLMRVME LERNVRHEEL 120 SFLVKDVHNF LNKYHRMNSN NDAKDLLEYC KQTKNENPNF QYTYTLDEES SK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G10240.1 | 6e-45 | FAR1 family protein |