PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc034521.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 716aa MW: 81314.9 Da PI: 7.9337

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc034521.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	38.9	2.9e-12	101	229	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.......................................te 49 +fY++Y+k+ GF+++ ++++ + ++ + f ++ gk+++++ + ++ Cse_sc034521.1_g010.1 101 NFYRHYSKMGGFDIKLGTESNPDGSDCPSIKYFSSNRGGKKRDSRYDrhrsdsdvavrgrvngkgvdgaidnkgkgidlslvgdsfAK 188 6***************9999888888888899999999998888899*******************************9999 PP FAR1 50 kerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 k r+++ +tgC a+l+v+k + +ev+ +++eHnH+l+ Cse_sc034521.1_g010.1 189 KIFRKNTPCKTGCLAQLRVRKIDGVMYEVYVFVEEHNHPLV 229 9999*********************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 716 aa Download sequence
MISSSNNVGE SSSSSNMYGS SSSSGSDGVR MSSSCSVSDD SSSRLVSVSS SSSVSNISNV 60 IDRSIGVSSV IEGSRVWVPD VYMSLKPTKG IVFVSLVQAY NFYRHYSKMG GFDIKLGTES 120 NPDGSDCPSI KYFSSNRGGK KRDSRYDRHR SDSDVAVRGR VNGKGVDGAI DNKGKGIDLS 180 LVGDSFAKKI FRKNTPCKTG CLAQLRVRKI DGVMYEVYVF VEEHNHPLVA QQDMQFLMSS 240 RDMGSSKQHF LMQVSNSNVG PVRAFKLMKE IYGGFENIGA TVVDCKNFKR DMSTFIGDRD 300 AQMVVEKLEN LEKHCEGFFV DYYKGEGDSL SALFWADSSA KMNYRRFGDV ISFDATFRSN 360 KYRMVFVPFT GIDNHKRYVT FSAGLLADET IASYKWLLRA FKKAFSTDPQ VGSSVCNNTD 420 FRKRSCAVVW NDQISPSIFE EEWKSIIDEF GQSENKWLSD IYDMRSRWIP AFLRDEDLSG 480 LMRTTSRSEF ENHFFGRWTN ANLTLVEFIS HFDSAMDSQR YSQRKNDHES RYKKPDLRTG 540 LKLEKDAAEI YTLNLFFDIQ EEISASVTHC LSVSTQQIGI FEKYSIRDTG VKKWNDKTYV 600 NTCMYILIFR CPFFSYVLFC SCHMSVTCSC KRFDLFGLLC RHIFYVLRLN GVEDFPREYV 660 LDRWCKNPDN VCLDAFVTAA DSSSDVVIRS IRRIVEDTID RLMPCREKLD VSFGVI

Sequence ? help Back to Top

Protein Sequence Length: 716 aa Download sequence

MISSSNNVGE SSSSSNMYGS SSSSGSDGVR MSSSCSVSDD SSSRLVSVSS SSSVSNISNV  60
IDRSIGVSSV IEGSRVWVPD VYMSLKPTKG IVFVSLVQAY NFYRHYSKMG GFDIKLGTES  120
NPDGSDCPSI KYFSSNRGGK KRDSRYDRHR SDSDVAVRGR VNGKGVDGAI DNKGKGIDLS  180
LVGDSFAKKI FRKNTPCKTG CLAQLRVRKI DGVMYEVYVF VEEHNHPLVA QQDMQFLMSS  240
RDMGSSKQHF LMQVSNSNVG PVRAFKLMKE IYGGFENIGA TVVDCKNFKR DMSTFIGDRD  300
AQMVVEKLEN LEKHCEGFFV DYYKGEGDSL SALFWADSSA KMNYRRFGDV ISFDATFRSN  360
KYRMVFVPFT GIDNHKRYVT FSAGLLADET IASYKWLLRA FKKAFSTDPQ VGSSVCNNTD  420
FRKRSCAVVW NDQISPSIFE EEWKSIIDEF GQSENKWLSD IYDMRSRWIP AFLRDEDLSG  480
LMRTTSRSEF ENHFFGRWTN ANLTLVEFIS HFDSAMDSQR YSQRKNDHES RYKKPDLRTG  540
LKLEKDAAEI YTLNLFFDIQ EEISASVTHC LSVSTQQIGI FEKYSIRDTG VKKWNDKTYV  600
NTCMYILIFR CPFFSYVLFC SCHMSVTCSC KRFDLFGLLC RHIFYVLRLN GVEDFPREYV  660
LDRWCKNPDN VCLDAFVTAA DSSSDVVIRS IRRIVEDTID RLMPCREKLD VSFGVI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	9e-70	FAR1 family protein