PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc034517.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family C3H
Protein Properties Length: 368aa    MW: 41897.1 Da    PI: 6.2962
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc034517.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH17.95.4e-0689112226
                            -S---SGGGGTS--TTTTT-SS-SS CS
                zf-CCCH   2 ktelCrffartGtCkyGdrCkFaHg 26 
                            k  lC ff + G+C  G +CkF+H+
  Cse_sc034517.1_g010.1  89 KSILCEFFKA-GQCAKGFKCKFSHD 112
                            6679**7777.*************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 368 aa     Download sequence    
MPPKQSKSEI AKKQKIVEDK TFGLKNKNKS KNVQKYVQSL HQNVQPKPDP SKLAAKKKKE  60
EEKAREKELN DLFKIAVVQP KVPVGVDPKS ILCEFFKAGQ CAKGFKCKFS HDLNVQRKGE  120
KIDIFSDKRD EGTMEDWDQE TLEKVVASKG KEYNQNKPTD IVCKHFLEAV EKKQYGWFWV  180
CPNGNKQCHY RHALPPGYIL KSQMKALLEE ESNKLAIEDE IEDQRAKVKT TTPMTTDLFL  240
EWKRKKMEAR DAGLAAQRAE RAKNDRMSGR ELFLSDASVF VDDAEAYDKY NREEESDYNR  300
NKVVSSLNYC EQNGSSTGGP STSTSVGAVS EEGNSEIDVD DDDLDMDELN ELEASLSKTS  360
IHIQEPEK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G20280.11e-161C3H family protein