PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc034203.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 312aa MW: 36074.6 Da PI: 10.187

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc034203.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	33.6	1.3e-10	30	83	47	90
FAR1 47 k..........tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 + ++ +rr+r+++r+gCka l+++++ ++k++v+++ ++HnH+l+ Cse_sc034203.1_g010.1 30 DtpssdiaevvKVIKRRKRVSQRCGCKALLRLRQTPENKFVVYTFFEKHNHSLV 83 1455666777778899************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 312 aa Download sequence
MSNSLEDDSM QGVKPSPKDD ISKKDKSKTD TPSSDIAEVV KVIKRRKRVS QRCGCKALLR 60 LRQTPENKFV VYTFFEKHNH SLVHENDYKY LRAARKLNFS KQHLLRQLSN ANIGPTKAWK 120 VMIEMYGGFE NIGVTDVECR NYRRGLENFI GNRDAQMVVE KLLSRQEFFS DFSVEYKQHK 180 KEKTLIGLFW ADSQAKLNYA AFGDVVSFDA TFRSNMYNMV LVPFTGIDNH NRCILFGAAL 240 LASEAAKRYT WLLKRFKKIF GSAPKVVVTD QDPSMKIAIE KIFPDSRHRL CMWHMLGIRK 300 FHSEESVTPN II

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-49	FAR1 family protein