PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc034151.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family B3
Protein Properties Length: 280aa    MW: 32155.8 Da    PI: 8.7687
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc034151.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B355.51e-1747130995
                            HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE..EEE CS
                     B3   9 dvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefelvvk 95 
                             ++++ +l+lp +f   +g+k+    +++l++ +grsW+++l+ + + +r +l+ G k+F++angLk+gD   F+l+++ +++ +vv 
  Cse_sc034151.1_g010.1  47 CTFRTPCLYLPVSFSIPNGLKTG---EMILRNDKGRSWKIQLR-KIGEKRLYLGCGLKDFCNANGLKVGDAYKFELIENeKDKPPVVN 130
                            3445556*******999999953...6***************3.444556***************************99677777775 PP
2B3651.2e-20185271591
                            -..-HHHHTT-EE--HHH.HTT---..--SEEEEEE.TTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE CS
                     B3   5 ltpsdvlksgrlvlpkkfaeehggkkeesktltled.esgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sef 90 
                             ++s+v ++ +l+lpk+fa+++++ ++e  +++l++ ++  sW+vkl+ +k+ + +++++GWkeF  angLk+gD + F+l+++ ++ 
  Cse_sc034151.1_g010.1 185 KVKSYVVERMLLYLPKEFARKNELFNKE--EMILKNvRNEGSWTVKLKSSKNNRYCYIGRGWKEFYVANGLKDGDHFKFELVDNgEKP 270
                            468*******************776434..7999997788*******99999999*************************99864544 PP

                            . CS
                     B3  91 e 91 
                            +
  Cse_sc034151.1_g010.1 271 T 271
                            4 PP
Sequence ? help Back to Top
Protein Sequence    Length: 280 aa     Download sequence    
LDYSELGKKP VSDDHIQLQK ETSLTSKKET NMTSNNHSYF VSTLKPCTFR TPCLYLPVSF  60
SIPNGLKTGE MILRNDKGRS WKIQLRKIGE KRLYLGCGLK DFCNANGLKV GDAYKFELIE  120
NEKDKPPVVN FSLNVDCAMD VEEPLRGSDS IQKLTSFGTL DVEEPLTVYE DLACGKKNYP  180
YFIGKVKSYV VERMLLYLPK EFARKNELFN KEEMILKNVR NEGSWTVKLK SSKNNRYCYI  240
GRGWKEFYVA NGLKDGDHFK FELVDNGEKP TANFHFQSIS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24700.14e-32B3 family protein