PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc034131.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family bHLH
Protein Properties Length: 269aa    MW: 28990.1 Da    PI: 5.8347
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc034131.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH33.38.9e-11152199455
                            HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                    HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                            +h+ +Er RR++i +++  L++l+P +    +k   Ka +L + ++YI+sLq
  Cse_sc034131.1_g010.1 152 SHSLAERARREKISERMKILQDLVPGC----NKVIGKALVLDEIINYIQSLQ 199
                            8*************************9....677*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 269 aa     Download sequence    
MDPPVMMNGG GGGGGFRSGN MCNLTEIWPF QMNLSGGGGG GGSGGYVDSN GGGGAYVEND  60
DPMVVDNSNG GGGNSNKKRR DDDELSKGVS TSSNSMLDSD GKRYKTLALE NENSELKPEG  120
ERSSGKKAEK PAEPSKQDYI HVRARRGQAT DSHSLAERAR REKISERMKI LQDLVPGCNK  180
VIGKALVLDE IINYIQSLQQ QVEFLSMKLE AVTSRSQPSP QGYPSKDYGQ QTFEMAGVPF  240
GSQPPREFSR GSSPEWLHMQ IGGSFERTT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G59640.12e-79bHLH family protein