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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | Cse_sc033875.1_g010.1 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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| Family | B3 | ||||||||
| Protein Properties | Length: 1534aa MW: 174578 Da PI: 4.2302 | ||||||||
| Description | B3 family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
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| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | B3 | 33.1 | 1e-10 | 10 | 98 | 2 | 94 |
EEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEE.TTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SSSE CS
B3 2 fkvltpsdvlksgrlvlpkkfaeehggkkeesktltled.esgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgrse 89
f +l++++++ l lp kf+++h g+k k+ +++ g W++k+ +k +++ y l +GW + vk+ gL g+f++F+++g+s
Cse_sc033875.1_g010.1 10 FHILMNPSSS---HLPLPPKFVTKHLGDKIL-KDPLIKSaNGGYLWKLKM--KKIDDHsYCLVDGWCNVVKDVGLLFGEFLLFRYVGSSV 93
5556555444...478*********555544.455666636779******..5555555****************************999 PP
E..EE CS
B3 90 felvv 94
f ++v
Cse_sc033875.1_g010.1 94 FLMHV 98
94444 PP
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| 2 | B3 | 34.5 | 3.6e-11 | 257 | 317 | 34 | 92 |
SEEEEEETTS-EEEEEE..EEETTE..EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE.. CS
B3 34 ktltledesgrsWevkliyrkksgr..yvltkGWkeFvkangLkegDfvvFkldgrsefel 92
t+tle+ +g + e+ ++ +kks++ ++ t+GWkeF ++n++ egD +vFk++ ++++ +
Cse_sc033875.1_g010.1 257 ETITLENYDGSEKEISVQSDKKSKStsCYVTAGWKEFQRSNDISEGDKCVFKFITSEDKIC 317
4899999999766666666777776679************************997666644 PP
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| 3 | B3 | 39.1 | 1.3e-12 | 384 | 465 | 11 | 90 |
HHTT-EE--HHH.HTT---..--SEEEEEETTS......-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE CS
B3 11 lksgrlvlpkkfaeehggkkeesktltledesg......rsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsef 90
+ ++ l+lp +f+++ g++ ++ktl+l++++g +++ ++ + +ry+l kGWk+F + ++ egD +vFk++ ++++
Cse_sc033875.1_g010.1 384 THNHVLRLPTDFVRSAGID--TKKTLMLRSLDGyemampVQFDTQY--GYHAKRYFLLKGWKDFMQGTNISEGDKCVFKFITSEDK 465
457789*********9999..4569********7777555555555..888999*************************9975554 PP
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| 4 | B3 | 40.9 | 3.6e-13 | 513 | 603 | 8 | 97 |
-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE.....EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE CS
B3 8 sdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr.....yvltkGWkeFvkangLkegDfvvFkldgrsef 90
++ ++rl+lp +f++ g++++e +++ +++g + ++ + +k++++ y lt+GW F + n++ +gD +vFk++ ++++
Cse_sc033875.1_g010.1 513 ITTGHKSRLYLPTDFVRLAGIDTKE--NIIMISLDGSESQMAV--WKGKRQtastrYHLTEGWYAFMHTNDISQGDKCVFKYITSEDK 596
45677899********888888655..69999****8888888..44444446666***************************87877 PP
..EEEEE CS
B3 91 elvvkvf 97
++ k++
Cse_sc033875.1_g010.1 597 MCLAKII 603
6666665 PP
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| 5 | B3 | 33.6 | 7e-11 | 622 | 713 | 7 | 98 |
.-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE.. CS
B3 7 psdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefel 92
+ + + +++l+lp +f++ ++++e +++++++g++ ++ ++ r ks +y l+ GW F + n++ +gD +vFk++ ++++ +
Cse_sc033875.1_g010.1 622 TISITHKHMLRLPPDFVALARIDTKE--NIIMKSLDGNESQMAVRPdkRFKSAQYNLSLGWVAFKQRNNISQGDECVFKYITSEDKMC 707
566778899*******9766766555..69999****99999996633445555***************************9999999 PP
EEEEE- CS
B3 93 vvkvfr 98
+vk+ +
Cse_sc033875.1_g010.1 708 LVKITK 713
999876 PP
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| 6 | B3 | 30.7 | 5.7e-10 | 748 | 826 | 13 | 91 |
TT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE. CS
B3 13 sgrlvlpkkfaeehggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefe 91
+++l lp +f++ + ++k +++++++g++ ++ l+ + s ry ++ GW F ++n++ +gD +vFk+++++++
Cse_sc033875.1_g010.1 748 KSMLLLPTDFVALARIG--TKKNIIIKSLDGNETQMALQSyeLRLSTRYCFSVGWMAFKRSNNISDGDECVFKYIRSEDKM 826
45699*****9555433..345799******99999995558888999***************************966553 PP
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| 7 | B3 | 33.8 | 6e-11 | 899 | 975 | 15 | 91 |
-EE--HHH.HTT---..--SEEEEEETTS..-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE. CS
B3 15 rlvlpkkfaeehggkkeesktltledesg..rsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefe 91
l+++ +f++ ++++e t+tl++ +g +++ v r+ks +y+ ++GWkeF ++n++ +gD vFk++ ++++
Cse_sc033875.1_g010.1 899 KLRFSPDFVALARMDTRE--TITLKNDDGceKEMPVHSDKRRKSTSYYVATGWKEFQQSNDISQGDKYVFKFITSEDKI 975
466677777555666555..89999999966777777777888889*************************99766654 PP
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| 8 | B3 | 37.6 | 3.8e-12 | 1275 | 1352 | 13 | 90 |
TT-EE--HHH.HTT---..--SEEEEEETTS..-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE CS
B3 13 sgrlvlpkkfaeehggkkeesktltledesg..rsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsef 90
+ rl++p +f+++ g++++ ktlt+ ++g +++ v++ ++ s+ry+ +k W+eF + n + egD +vFk++ ++++
Cse_sc033875.1_g010.1 1275 KFRLYMPVDFVRAAGIDTK--KTLTILGLDGyeKEMPVRYDKKGESKRYYVAKEWREFKRNNAILEGDKCVFKFITSDDK 1352
679*********9999954..578888888877999999977788888*************************9874433 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 1534 aa Download sequence |
MADQRPPSFF HILMNPSSSH LPLPPKFVTK HLGDKILKDP LIKSANGGYL WKLKMKKIDD 60 HSYCLVDGWC NVVKDVGLLF GEFLLFRYVG SSVFLMHVYS VNGCEKILVP KIKVPSFKVV 120 DYGCIDDVDD EVEEVDDVVY DVDDDDDDHH HHVEDEDDVE FVDDGDEDDD LEEVEDEDDV 180 EFVNGGDKDD GMEEDDDVEF VNDGDKDDGM EEDDDVLYDV DDDDDDVEDE DDIEFVYDSD 240 EGDDVDVDAL ARIDTRETIT LENYDGSEKE ISVQSDKKSK STSCYVTAGW KEFQRSNDIS 300 EGDKCVFKFI TSEDKICLAK ITKKKTPARP LPPAAEAPVT EVDIDDVGDD DDMDVEDDND 360 KDEDEDFELV DEDDPFFVVT ITPTHNHVLR LPTDFVRSAG IDTKKTLMLR SLDGYEMAMP 420 VQFDTQYGYH AKRYFLLKGW KDFMQGTNIS EGDKCVFKFI TSEDKLCLAK ITKPPPAAET 480 LETEVNDDDK DEYENENEDV EPVDVDPFFV ATITTGHKSR LYLPTDFVRL AGIDTKENII 540 MISLDGSESQ MAVWKGKRQT ASTRYHLTEG WYAFMHTNDI SQGDKCVFKY ITSEDKMCLA 600 KIIKALATEV DVDDMDPSFV VTISITHKHM LRLPPDFVAL ARIDTKENII MKSLDGNESQ 660 MAVRPDKRFK SAQYNLSLGW VAFKQRNNIS QGDECVFKYI TSEDKMCLVK ITKASATEVD 720 DGMDVEDDND TNDDADPFFV VTIIPSHKSM LLLPTDFVAL ARIGTKKNII IKSLDGNETQ 780 MALQSYELRL STRYCFSVGW MAFKRSNNIS DGDECVFKYI RSEDKMSVAK ITKKITRATE 840 LPAEVDNDDM DDEDVDEEGK GEDAKLVDED DDNDNEEDAY DYDGDPFFIL TISKANQYKL 900 RFSPDFVALA RMDTRETITL KNDDGCEKEM PVHSDKRRKS TSYYVATGWK EFQQSNDISQ 960 GDKYVFKFIT SEDKICLAKI TERKTPARSL PPAAEAPVTE VDADDVEDDD IMDDKDTEDG 1020 NDEDEDEDVE LVDEDDPFFV KTITARNLYL PIDFVRLARI DTKENIIMIS LDGNECQMSV 1080 GKDTRKPSTK YHLSKGVYAF MRSNNISPGD KCVFKYIASE DKVCLAKIIK AQAKKVDVDD 1140 EDPSFVVTIT TMHKTMLRFL SDFVRLAGID KKKTIVFKNL NGYEKEMAVQ RVNRFRSTSY 1200 SVASGLKEFL RDTDISEGDI CVFKFIRSED KICLAKITKK KTPARPLPPA IEPPVTEVER 1260 VYDGDPFFVA TIIHKFRLYM PVDFVRAAGI DTKKTLTILG LDGYEKEMPV RYDKKGESKR 1320 YYVAKEWREF KRNNAILEGD KCVFKFITSD DKLCLAKIKK KKTPTSCPLP PATDDDDDDD 1380 DDEDENEDVD DEDPFFVVTI NHKFMLVRFS LQSVEDKVCL AKFTKARPTQ VDDDDDVEVD 1440 IGMDDKDAYK DVELVDGDPF FVVTITTIHK SMLRLPSDFV TLSRIDTEEN IIIKTLDGNE 1500 RLMALRSCQQ NNSTHYCLSM GWPAFMRSKL GINS |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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| Hit ID | E-value | Description | ||||
| AT1G26680.1 | 4e-11 | B3 family protein | ||||
| ©2010-2022, Center
for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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