PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc033781.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 457aa MW: 52420.1 Da PI: 9.0405

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc033781.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	38	5.4e-12	2	86	5	83
FAR1 5 eYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk......tekerrtraetrtgCkaklkvkkek.dgkwevtklel 83 +YA+++GF vrks +k+ r+g ++++ +vC++eg+++ + + ++k++r+++ + tgCka+++ ++ ++k+++t +++ Cse_sc033781.1_g010.1 2 KYASKAGFVVRKSCQKRL-RSGIVKQKYLVCNREGYPKGIHVDtldlenSDKQKRSSNLHITGCKARVMFELIPgSSKYKLTVFDS 86 7*********998887.8898**********9988888999988899999999************9999999998875 PP

Sequence ? help Back to Top
Protein Sequence Length: 457 aa Download sequence
MKYASKAGFV VRKSCQKRLR SGIVKQKYLV CNREGYPKGI HVDTLDLENS DKQKRSSNLH 60 ITGCKARVMF ELIPGSSKYK LTVFDSDSDA QMLITKMENR QKHVPDFSFD YLVENAELSA 120 IFWADEVSKY NYKEFCDVVS FDATYRTNKY KMMFVPFTAI DNHRKCVTDG AMRKAIEQEF 180 AGSKHRLCMW HITQKLPGKV YTRPLFELVQ AEIFAGTWFC QIDTKSLFEG SEVSIIKEKK 240 FVDEVMEKKK AKKKEKFKKK GDDTDKNEEE EEPINLFHRE DGLYKNANVE MIPNEYILRR 300 WTKNLIPAGL RNKRNGYGEK NEIVENYANE ATSIVDHCVH MLSKDETRLA AFIEKLKLLK 360 LDVEADCPNP PSKDKLDNLE ELFGVPKPPV VAVKNPSGCK PKGREKSRIK GGKEQAIDES 420 SVNRNACSVC GAKDGHNKRT CPNKYRVQDD IVQSEAT

Sequence ? help Back to Top

Protein Sequence Length: 457 aa Download sequence

MKYASKAGFV VRKSCQKRLR SGIVKQKYLV CNREGYPKGI HVDTLDLENS DKQKRSSNLH  60
ITGCKARVMF ELIPGSSKYK LTVFDSDSDA QMLITKMENR QKHVPDFSFD YLVENAELSA  120
IFWADEVSKY NYKEFCDVVS FDATYRTNKY KMMFVPFTAI DNHRKCVTDG AMRKAIEQEF  180
AGSKHRLCMW HITQKLPGKV YTRPLFELVQ AEIFAGTWFC QIDTKSLFEG SEVSIIKEKK  240
FVDEVMEKKK AKKKEKFKKK GDDTDKNEEE EEPINLFHRE DGLYKNANVE MIPNEYILRR  300
WTKNLIPAGL RNKRNGYGEK NEIVENYANE ATSIVDHCVH MLSKDETRLA AFIEKLKLLK  360
LDVEADCPNP PSKDKLDNLE ELFGVPKPPV VAVKNPSGCK PKGREKSRIK GGKEQAIDES  420
SVNRNACSVC GAKDGHNKRT CPNKYRVQDD IVQSEAT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	4e-15	FAR1 family protein