PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc033430.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 779aa MW: 89442.3 Da PI: 8.9174

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc033430.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	47	8.4e-15	123	216	3	90
FAR1 3 YneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk......tekerrtraetrtgCkaklkvkkek.dgkwevtklel 83 Y +YA +vGF vrks +k+ r+g ++++ +vC++eg ++ + + +++++r+++ + gCka+++ ++ + ++ ++ + + Cse_sc033430.1_g010.1 123 YMKYALKVGFVVRKSCQKRL-RSGIVKQKYLVCNREGCPKGIHVDtldlenSDNKKRSSNLHIAGCKARVMFELIPgSTQYTLIVFYS 209 99**********998887.8898*********9998888899988888999999999*********9******* PP FAR1 84 eHnHela 90 HnHel Cse_sc033430.1_g010.1 210 IHNHELE 216 ***96 PP

Sequence ? help Back to Top
Protein Sequence Length: 779 aa Download sequence
MDSIPNSLVS SDRSSSSQEI GATELSSSSE NVVVSDLPST TEDIVVSDDV SAKYTEEIVA 60 YEHGDESAAI IKLNASKTPE SFSTHSNFDT PGGTVYYIPK VPVDVLLAKR NVYNSVDECI 120 SAYMKYALKV GFVVRKSCQK RLRSGIVKQK YLVCNREGCP KGIHVDTLDL ENSDNKKRSS 180 NLHIAGCKAR VMFELIPGST QYTLIVFYSI HNHELERKEY KNFSKTERQL TYAEQLFIVK 240 ATSVNIGATR AHHLLTGLKE SYLLVHAKME NRKKHVPYFL FDYLVENAAL SAIFWAGEVS 300 KYNYKEFCDV VSFDATYRTN KYKMMFVPFI AIDNHRKCVT VAAGLLKNET SNSYIWLLKA 360 FIKAFGKAPS IVVTDQDWAM RKAIEQEFAG SKHRLCMWHI IEKLPGKMCS KIYDHTDFKM 420 KFNQTVWNMY IGPYEFEYQW GKLLDEFKLQ NHKWTTSRSE SENSFFSHFT NSGSTLMNSM 480 ICFETTMKKQ RHIQERLDHK SIDYVPTLRT YLKIERHASK VYTRPLFEFV PAEIFAGTWF 540 CQIDTKSLVE GSEVSVIKEK NFVDELMEKK KAKKKEKSKK KANDNEKNEE EKEPINLFHR 600 EDGLYKNENV EMIPNQYILR RWTKNLIPAG LRNKRNMYGE KNEIVENYAN EATSIVDHCV 660 HMLSKDETRL AAFIEKLKLL KIDVEADCPN PPSKDKLDNL EELVRVPKPP VVVVKNPSGC 720 KPKGREKMRI KGGKEQAIYE SSINRNSCSK CGAKDGHNKR TCPNKYRVED DLVQSQVTS

Sequence ? help Back to Top

Protein Sequence Length: 779 aa Download sequence

MDSIPNSLVS SDRSSSSQEI GATELSSSSE NVVVSDLPST TEDIVVSDDV SAKYTEEIVA  60
YEHGDESAAI IKLNASKTPE SFSTHSNFDT PGGTVYYIPK VPVDVLLAKR NVYNSVDECI  120
SAYMKYALKV GFVVRKSCQK RLRSGIVKQK YLVCNREGCP KGIHVDTLDL ENSDNKKRSS  180
NLHIAGCKAR VMFELIPGST QYTLIVFYSI HNHELERKEY KNFSKTERQL TYAEQLFIVK  240
ATSVNIGATR AHHLLTGLKE SYLLVHAKME NRKKHVPYFL FDYLVENAAL SAIFWAGEVS  300
KYNYKEFCDV VSFDATYRTN KYKMMFVPFI AIDNHRKCVT VAAGLLKNET SNSYIWLLKA  360
FIKAFGKAPS IVVTDQDWAM RKAIEQEFAG SKHRLCMWHI IEKLPGKMCS KIYDHTDFKM  420
KFNQTVWNMY IGPYEFEYQW GKLLDEFKLQ NHKWTTSRSE SENSFFSHFT NSGSTLMNSM  480
ICFETTMKKQ RHIQERLDHK SIDYVPTLRT YLKIERHASK VYTRPLFEFV PAEIFAGTWF  540
CQIDTKSLVE GSEVSVIKEK NFVDELMEKK KAKKKEKSKK KANDNEKNEE EKEPINLFHR  600
EDGLYKNENV EMIPNQYILR RWTKNLIPAG LRNKRNMYGE KNEIVENYAN EATSIVDHCV  660
HMLSKDETRL AAFIEKLKLL KIDVEADCPN PPSKDKLDNL EELVRVPKPP VVVVKNPSGC  720
KPKGREKMRI KGGKEQAIYE SSINRNSCSK CGAKDGHNKR TCPNKYRVED DLVQSQVTS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	9e-47	FAR1 family protein