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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc033361.1_g010.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 267aa MW: 30759.7 Da PI: 8.1844 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 99.1 | 1.8e-31 | 41 | 90 | 1 | 50 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50 krien++nrqvtf+kRrng+lKKA+ELSvLCdaeva+i+fss+g+lyey+ Cse_sc033361.1_g010.1 41 KRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYA 90 79***********************************************8 PP | |||||||
2 | K-box | 106.2 | 3.9e-35 | 111 | 209 | 6 | 100 |
K-box 6 gksleeakaeslqqelakLkkeienLq....reqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqe 89 + s++ea+a+++qqe+ kL+++i nLq + R+++Ge+L+++ +k+L++Le++Lek++++iRskKnell+++ie++qk+e el++ Cse_sc033361.1_g010.1 111 SGSVSEANAQYYQQESGKLRSQIANLQnqnrQFYRNIMGESLTDMPMKDLKNLETKLEKAITRIRSKKNELLFAEIEYMQKRELELHN 198 44589**********************5433334789*************************************************** PP K-box 90 enkaLrkklee 100 +n+ Lr+k++e Cse_sc033361.1_g010.1 199 NNQFLRAKIAE 209 ********986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 267 aa Download sequence |
MANSDAFELD FSCVDRSMSF PDDSADMSPQ RKLGKGKIEI KRIENTTNRQ VTFCKRRNGL 60 LKKAYELSVL CDAEVALIVF SSRGRLYEYA NNSVRGTIDR YKKACLDPPS SGSVSEANAQ 120 YYQQESGKLR SQIANLQNQN RQFYRNIMGE SLTDMPMKDL KNLETKLEKA ITRIRSKKNE 180 LLFAEIEYMQ KRELELHNNN QFLRAKIAEN ERSAQHQHMS LMPGSSDYEL VTPHQPFDGR 240 NYLQSNEMQP SNDYSCQDQT PLQLVIT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G18960.1 | 1e-117 | MIKC_MADS family protein |