PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc033266.1_g040.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 613aa MW: 69935.5 Da PI: 6.8521

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc033266.1_g040.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	39.5	1.9e-12	99	186	3	85
FAR1 3 YneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk......tekerrtraetrtgCkaklkvkkekdgkwevtklele 84 Y +YA+++GF vrks++k+ r+g ++++ +vC++eg ++ + + ++k++r+++ + tgCka+++ ++ + ++ + + Cse_sc033266.1_g040.1 99 YMKYASKAGFVVRKSYQKRL-RSGIVKQKYLVCNREGCPKGIHVDtldlenSDKQKRSSNLHITGCKARVMFELIPAASVNICATRAH 185 99***********99998.8888*********99988888999888899999999**********999888888877777 PP FAR1 85 H 85 H Cse_sc033266.1_g040.1 186 H 186 6 PP

Sequence ? help Back to Top
Protein Sequence Length: 613 aa Download sequence
MDSISNSSVS SDRSSSSSQE IGATELSTTD STTESAPENV VVSITESATE DIVASDDVSA 60 KYTEEIVAYE HGDESTAIKN VLLAKGNIFN SVDECISAYM KYASKAGFVV RKSYQKRLRS 120 GIVKQKYLVC NREGCPKGIH VDTLDLENSD KQKRSSNLHI TGCKARVMFE LIPAASVNIC 180 ATRAHHLLTG LKGSYLLVHG TTVDFKNFFR SVNCYIGDSD AHMLIAKMEN RQKHVPDFSF 240 DYLVENAELS AIFWADEVSK YNYKEFCDII CSKIYDHTDF KRKFNQIVWN MYIGPDEFEY 300 QWGKLLDEFN LHNNKWLTKM FRIRSCWIPA FFVDSPLCGL MRKTSRSESE NSFFSHFTNS 360 DGNGKTEAYT IESIDYVPTL RTYLKIERHA SKVYTRPLFE LVQAEIFAGT WFCQIETKSL 420 VEGSEVSVIK EKKFVDELME KKKAKKKEKF KKKGDDNDKN EEEEEPINLF HREEGLHIFC 480 VFKNANVEMI PNQYILRLWT KNLIPAGLRN KRNKYGEKND IVENYANEAT SIVDHCVHML 540 SKDETRLAAF IEKLKLLKLD VEADCPNPPS KDKLDNLEEL VGVPKPPVVA VKNPSGCKPK 600 EREKSPKLVQ QHI

Sequence ? help Back to Top

Protein Sequence Length: 613 aa Download sequence

MDSISNSSVS SDRSSSSSQE IGATELSTTD STTESAPENV VVSITESATE DIVASDDVSA  60
KYTEEIVAYE HGDESTAIKN VLLAKGNIFN SVDECISAYM KYASKAGFVV RKSYQKRLRS  120
GIVKQKYLVC NREGCPKGIH VDTLDLENSD KQKRSSNLHI TGCKARVMFE LIPAASVNIC  180
ATRAHHLLTG LKGSYLLVHG TTVDFKNFFR SVNCYIGDSD AHMLIAKMEN RQKHVPDFSF  240
DYLVENAELS AIFWADEVSK YNYKEFCDII CSKIYDHTDF KRKFNQIVWN MYIGPDEFEY  300
QWGKLLDEFN LHNNKWLTKM FRIRSCWIPA FFVDSPLCGL MRKTSRSESE NSFFSHFTNS  360
DGNGKTEAYT IESIDYVPTL RTYLKIERHA SKVYTRPLFE LVQAEIFAGT WFCQIETKSL  420
VEGSEVSVIK EKKFVDELME KKKAKKKEKF KKKGDDNDKN EEEEEPINLF HREEGLHIFC  480
VFKNANVEMI PNQYILRLWT KNLIPAGLRN KRNKYGEKND IVENYANEAT SIVDHCVHML  540
SKDETRLAAF IEKLKLLKLD VEADCPNPPS KDKLDNLEEL VGVPKPPVVA VKNPSGCKPK  600
EREKSPKLVQ QHI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G32250.2	2e-14	FAR1 family protein