PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc033094.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 367aa MW: 42760.6 Da PI: 5.9309

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc033094.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	57	6.6e-18	66	160	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.........tekerrtraetrtgCkaklkvkkekdgkwevtk 80 Y++YA e+GF vr+ ++++ g +++++f Cskeg+++ + k+ +++ +r r+e rt+Cka++ v ++ +k++v++ Cse_sc033094.1_g010.1 66 VYKDYAAEAGFIVRRGHQTND--GGIVINKEFLCSKEGTKKVKVKEfdslkdncdAKSVKRIRSEFRTNCKARIYVVRS-GEKYRVKN 150 7*************98877..99****************9***998999999**********999.9*** PP FAR1 81 leleHnHela 90 +++e nH ++ Cse_sc033094.1_g010.1 151 FVEENNHGFF 160 *****986 PP

Sequence ? help Back to Top
Protein Sequence Length: 367 aa Download sequence
MRQNCASNEF VEDENLSADV NVEENEEVNS PDFFTSTSML IKLVVVKTLV PVEGTLFDSV 60 EEAYKVYKDY AAEAGFIVRR GHQTNDGGIV INKEFLCSKE GTKKVKVKEF DSLKDNCDAK 120 SVKRIRSEFR TNCKARIYVV RSGEKYRVKN FVEENNHGFF TAEDRHLQKS HRSMSLAHQY 180 FAIKASNLNI GPCMSFSFIA ELLGGYENVG ATKIDFKNMS RDIYSYIGKY DAQMIIDKLS 240 ILKERDENFT FEFKTNTDDQ DPSMLIAIPD MFKTAKHRLC MWHIMNKLPT KIGSSICEEG 300 GFKKRLCSLV WRESDKPIEF VQKWEALLDE FDLDKHKWLN DMFNIKELWI PAYFRDNEWF 360 DENYFTI

Sequence ? help Back to Top

Protein Sequence Length: 367 aa Download sequence

MRQNCASNEF VEDENLSADV NVEENEEVNS PDFFTSTSML IKLVVVKTLV PVEGTLFDSV  60
EEAYKVYKDY AAEAGFIVRR GHQTNDGGIV INKEFLCSKE GTKKVKVKEF DSLKDNCDAK  120
SVKRIRSEFR TNCKARIYVV RSGEKYRVKN FVEENNHGFF TAEDRHLQKS HRSMSLAHQY  180
FAIKASNLNI GPCMSFSFIA ELLGGYENVG ATKIDFKNMS RDIYSYIGKY DAQMIIDKLS  240
ILKERDENFT FEFKTNTDDQ DPSMLIAIPD MFKTAKHRLC MWHIMNKLPT KIGSSICEEG  300
GFKKRLCSLV WRESDKPIEF VQKWEALLDE FDLDKHKWLN DMFNIKELWI PAYFRDNEWF  360
DENYFTI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	5e-18	FAR1 family protein