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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc032862.1_g010.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 246aa MW: 28851.5 Da PI: 7.6811 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 99.6 | 1.2e-31 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krienk+nrqvtf+kRrng+lKKA+ELSvLCdaeva+iifs++gklye+ss Cse_sc032862.1_g010.2 9 KRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSTRGKLYEFSS 59 79***********************************************96 PP | |||||||
2 | K-box | 69.7 | 9.6e-24 | 85 | 176 | 9 | 100 |
K-box 9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrk 96 +e+ +++s++qe+ +Lk++++ L++ R++ Ge++++Ls +eL++Le+qL+ slk+iR+ +++ l++ + e+qk+e+ l e nk+Lr Cse_sc032862.1_g010.2 85 KEDLQEQSSYQEYMRLKERYDALKQLERNYYGEEIDNLSTNELESLERQLHCSLKQIRTIRTQSLVDRLYEQQKMEHHLYESNKTLRL 172 5778899********************************************************************************* PP K-box 97 klee 100 k+ee Cse_sc032862.1_g010.2 173 KFEE 176 *986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 246 aa Download sequence |
MGKGRLELKR IENKINRQVT FAKRRNGLLK KAYELSVLCD AEVALIIFST RGKLYEFSST 60 SSMLKTLERY EKSSFGPPEQ RRPAKEDLQE QSSYQEYMRL KERYDALKQL ERNYYGEEID 120 NLSTNELESL ERQLHCSLKQ IRTIRTQSLV DRLYEQQKME HHLYESNKTL RLKFEEESQA 180 EALQWEAHAR ANGMVYGHPQ HQLSQTTHDA FYHPTGCETT LQIGYQTDMS AVTSTSMNHQ 240 MQGWPA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G24260.1 | 9e-91 | MIKC_MADS family protein |