PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc032810.1_g030.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 665aa MW: 77804.5 Da PI: 8.217

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc032810.1_g030.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	53.1	1e-16	56	186	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk......................................... 47 +fY +Y+k+ GF+ r+ ++k k t + ++Cs++g +e+++ k Cse_sc032810.1_g030.1 56 NFYVAYGKKGGFDCRRGGQYKAKGFSDATLKYLYCSRQGLNEDSNGKtgdsitdndiseqseisddshrfgdvkkkqtrkrtsfrfgd 143 6***************************************999999***********************************9 PP FAR1 48 .tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 ++k+ r+r++ r+gC a+l++kk + +evtk+e HnH+l+ Cse_sc032810.1_g030.1 144 vKKKQTRKRTSFRCGCSASLTIKKI-GNIYEVTKFEDGHNHPLV 186 9899999999***********.9*************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 665 aa Download sequence
MLTENDNLSA DVETVRIRDH VGFYVCGKDG TRTWYPDCLE KPIEGCQFIL VDQAYNFYVA 60 YGKKGGFDCR RGGQYKAKGF SDATLKYLYC SRQGLNEDSN GKTGDSITDN DISEQSEISD 120 DSHRFGDVKK KQTRKRTSFR FGDVKKKQTR KRTSFRCGCS ASLTIKKIGN IYEVTKFEDG 180 HNHPLVSEKD MIFLKNSRKM GYTKQHFLYQ VINENFGHAV GFRLMKQVYG GFDRVGTTVI 240 DCKNQKKKIS VFIGDRDAQM AVEKLLSRKI HYPGFYVNYF KGDDDKLVEL FWADEEAIKD 300 YASFGDIVLF DATFRSNKYE MVFVPFTGIN HHNHCLTFAS GLLADESAGA YIWLLEQFKE 360 AFGKEPEVVI TDQDPSMKIA IEECFPNTRH RLCMWHIMQK LTTKVGTALC NMTDFKQRIC 420 DIVWTDQILP EEFEREWDRM INDFELYDNK WLGDMFNMRE RWIPAYLRDV HMAGLMRTTS 480 RSESENHFFG KWTSPHLTLV EFLSHYDTAI EYQRYIERKN DHDSRYKTPK FKTEHPMEKE 540 ACKLYTRTLF FDVHDEIFGS YKYCIGLSVV QAENMEKYAI RDTEFRNGKS GDNDFAVYQV 600 DFCKSEMIVQ CSCNRYESYG LLCRHAFYVL RMNNVKEFPR KYLKKRWLKN TKPSRSALPR 660 IIGAS

Sequence ? help Back to Top

Protein Sequence Length: 665 aa Download sequence

MLTENDNLSA DVETVRIRDH VGFYVCGKDG TRTWYPDCLE KPIEGCQFIL VDQAYNFYVA  60
YGKKGGFDCR RGGQYKAKGF SDATLKYLYC SRQGLNEDSN GKTGDSITDN DISEQSEISD  120
DSHRFGDVKK KQTRKRTSFR FGDVKKKQTR KRTSFRCGCS ASLTIKKIGN IYEVTKFEDG  180
HNHPLVSEKD MIFLKNSRKM GYTKQHFLYQ VINENFGHAV GFRLMKQVYG GFDRVGTTVI  240
DCKNQKKKIS VFIGDRDAQM AVEKLLSRKI HYPGFYVNYF KGDDDKLVEL FWADEEAIKD  300
YASFGDIVLF DATFRSNKYE MVFVPFTGIN HHNHCLTFAS GLLADESAGA YIWLLEQFKE  360
AFGKEPEVVI TDQDPSMKIA IEECFPNTRH RLCMWHIMQK LTTKVGTALC NMTDFKQRIC  420
DIVWTDQILP EEFEREWDRM INDFELYDNK WLGDMFNMRE RWIPAYLRDV HMAGLMRTTS  480
RSESENHFFG KWTSPHLTLV EFLSHYDTAI EYQRYIERKN DHDSRYKTPK FKTEHPMEKE  540
ACKLYTRTLF FDVHDEIFGS YKYCIGLSVV QAENMEKYAI RDTEFRNGKS GDNDFAVYQV  600
DFCKSEMIVQ CSCNRYESYG LLCRHAFYVL RMNNVKEFPR KYLKKRWLKN TKPSRSALPR  660
IIGAS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	2e-88	FAR1 family protein