PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc032544.1_g030.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 510aa MW: 58473.9 Da PI: 9.824

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc032544.1_g030.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	27.3	1.2e-08	204	284	7	89
FAR1 7 AkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHel 89 A+++GF +++ ksk+ g ++ +f Cs++g++++e + ++ +r++++++++C +l k k + w + HnH++ Cse_sc032544.1_g030.1 204 AESIGFVIVIGKSKTD--RGYKYSIEFLCSRHGTSSREGLE-DELQRQTSTDKCNCPFRLLAKFIKrFNGWILRVKCPGHNHNF 284 889*******9998..5667***********9999.888999999********9997888988888899*86 PP

Sequence ? help Back to Top
Protein Sequence Length: 510 aa Download sequence
MLLKNVFISS KFKVHDWRWP DSKGIKVYMI DVVRGLICDY NTWLLFSSSP RKICRLKLEG 60 CKVRFDPTLP SIRFLSSSHR KNFSNNCTKS PVYKSHKTAQ ASQNCTKLHK SNITAQASQN 120 CTSLKTAQAS QLHKSQTAQA QDTHKLPNNK KKPTTNNNQP TTATSGPDQQ QQQATTMSMS 180 SSPFNTQEVF GTEVDLINWV RSTAESIGFV IVIGKSKTDR GYKYSIEFLC SRHGTSSREG 240 LEDELQRQTS TDKCNCPFRL LAKFIKRFNG WILRVKCPGH NHNFPDSLHG FSQAMRLKES 300 ELVFVTQMTK QHVALRIILS SLKEMDPNNV STIKTVYNAQ EKIRHDSRGD LTPIQLLLVH 360 LQRKGYTYYP RINDHTNELD EIFFVHPTSY AMWTTYPEIM LMDSTYNTNM FKLPFFTVVG 420 VTPTNTTFSM AFSFLDKEKK PNFKWVLECV KLVIQEQYYP RVIVTDRDLA QGLKTMGVDT 480 SCGRKYFNKS TLPSGILYEL IDDINNLHVE

Sequence ? help Back to Top

Protein Sequence Length: 510 aa Download sequence

MLLKNVFISS KFKVHDWRWP DSKGIKVYMI DVVRGLICDY NTWLLFSSSP RKICRLKLEG  60
CKVRFDPTLP SIRFLSSSHR KNFSNNCTKS PVYKSHKTAQ ASQNCTKLHK SNITAQASQN  120
CTSLKTAQAS QLHKSQTAQA QDTHKLPNNK KKPTTNNNQP TTATSGPDQQ QQQATTMSMS  180
SSPFNTQEVF GTEVDLINWV RSTAESIGFV IVIGKSKTDR GYKYSIEFLC SRHGTSSREG  240
LEDELQRQTS TDKCNCPFRL LAKFIKRFNG WILRVKCPGH NHNFPDSLHG FSQAMRLKES  300
ELVFVTQMTK QHVALRIILS SLKEMDPNNV STIKTVYNAQ EKIRHDSRGD LTPIQLLLVH  360
LQRKGYTYYP RINDHTNELD EIFFVHPTSY AMWTTYPEIM LMDSTYNTNM FKLPFFTVVG  420
VTPTNTTFSM AFSFLDKEKK PNFKWVLECV KLVIQEQYYP RVIVTDRDLA QGLKTMGVDT  480
SCGRKYFNKS TLPSGILYEL IDDINNLHVE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-09	FAR1 family protein