PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc032534.1_g030.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

HB-other

Protein Properties

Length: 557aa MW: 62617.1 Da PI: 7.2973

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc032534.1_g030.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	52.5	8.6e-17	20	75	2	57
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 kR t++ql +Le+++++++yps++++ e A+++gL+e+qV+ WF+ rR k+k+ Cse_sc032534.1_g030.1 20 PKRIHKTPKQLIALENFYNEHKYPSEAMKLEVAESIGLSEKQVSGWFCHRRLKDKN 75 689999***********************************************995 PP

Sequence ? help Back to Top
Protein Sequence Length: 557 aa Download sequence
MEEPQGVQAD ENGALLDKKP KRIHKTPKQL IALENFYNEH KYPSEAMKLE VAESIGLSEK 60 QVSGWFCHRR LKDKNKSPND EIQTHGKQDR SSGVIQDRGS GLRQDSCGST KQGDNKHFEP 120 KEVESRRFPA GGLFPTEVPF DHVSQHNNNM DVDDDTSSGS SSPIKDKFRP QNVDRLGTLT 180 STYPTHSDVK SVKGRTGPSG FLKVKGQVEN AAITAVKRQL GRHYREDGPP LGIEFEELPP 240 GAFENLVTDP VNQSYYYSDR TALQSLDGSN SFQHPNSNNM YERYNPQSYH SMDLDESGVE 300 IRHAPRHREK QSDSYYKQTL PLSKHRDSLP GRSFQMEVND DSAGATSIHD LREHFDTKIK 360 HGPGVRRPDS LSNRHPVAYG RNFDSKQAEN YPRSHNNGPP RVNYIDRIEP LTSDMTVKRG 420 EFAELEDGGL SRKISKDGQF DGERRGIDKY SKLVSVKGHP GNEMKITKRS RDDFTHQVYP 480 RKEAVADFPP INNKTKRPTA HMISSFSDDE TAEATSSGER KKVANKRLTS LISVDDDGVH 540 PIMSSSNPDD ADLPPIL

Sequence ? help Back to Top

Protein Sequence Length: 557 aa Download sequence

MEEPQGVQAD ENGALLDKKP KRIHKTPKQL IALENFYNEH KYPSEAMKLE VAESIGLSEK  60
QVSGWFCHRR LKDKNKSPND EIQTHGKQDR SSGVIQDRGS GLRQDSCGST KQGDNKHFEP  120
KEVESRRFPA GGLFPTEVPF DHVSQHNNNM DVDDDTSSGS SSPIKDKFRP QNVDRLGTLT  180
STYPTHSDVK SVKGRTGPSG FLKVKGQVEN AAITAVKRQL GRHYREDGPP LGIEFEELPP  240
GAFENLVTDP VNQSYYYSDR TALQSLDGSN SFQHPNSNNM YERYNPQSYH SMDLDESGVE  300
IRHAPRHREK QSDSYYKQTL PLSKHRDSLP GRSFQMEVND DSAGATSIHD LREHFDTKIK  360
HGPGVRRPDS LSNRHPVAYG RNFDSKQAEN YPRSHNNGPP RVNYIDRIEP LTSDMTVKRG  420
EFAELEDGGL SRKISKDGQF DGERRGIDKY SKLVSVKGHP GNEMKITKRS RDDFTHQVYP  480
RKEAVADFPP INNKTKRPTA HMISSFSDDE TAEATSSGER KKVANKRLTS LISVDDDGVH  540
PIMSSSNPDD ADLPPIL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G03250.1	8e-69	HB-other family protein