PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc032324.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

MYB

Protein Properties

Length: 343aa MW: 38625.6 Da PI: 6.837

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc032324.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	50.9	3.5e-16	36	83	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g W++eEde+l ++ + G+g+W+ Iar g+ R++k+c++rw +yl Cse_sc032324.1_g010.1 36 KGLWSPEEDEKLMNYMLRNGNGCWTDIARNAGLQRCGKSCRLRWINYL 83 678*******************************************97 PP
2	Myb_DNA-binding	47.8	3.3e-15	89	132	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+++++E++l+++++ lG++ W+ Ia++++ gRt++++k++w++ Cse_sc032324.1_g010.1 89 RGAFSPQEQDLILHLHSTLGNR-WSQIAARLP-GRTDNEIKNFWNS 132 89******************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 343 aa Download sequence
MLRCTLSYDL ILLFGYLAMR KPDNNVVSKG TFKTRKGLWS PEEDEKLMNY MLRNGNGCWT 60 DIARNAGLQR CGKSCRLRWI NYLRPDLKRG AFSPQEQDLI LHLHSTLGNR WSQIAARLPG 120 RTDNEIKNFW NSTIKKKLKT NKSDASTTSP NDSINGDLSY DASTNMIGEA GTFMSMHDHD 180 IMTMCMESCL ALPTNTLSST HNNPNLIKGH DQFGHVPPLV LDNTNYDTNG GSSFLKMPSW 240 LGQGGYGDSL EVPYMHGMAN DIMNPSLGNK IIQENVNTTI NHHELVKKST HVSNHFNEAV 300 DSNIKVEEVV GFGNHWQGEN FKIAEWDFEG FLANVSSIPY LDF

Sequence ? help Back to Top

Protein Sequence Length: 343 aa Download sequence

MLRCTLSYDL ILLFGYLAMR KPDNNVVSKG TFKTRKGLWS PEEDEKLMNY MLRNGNGCWT  60
DIARNAGLQR CGKSCRLRWI NYLRPDLKRG AFSPQEQDLI LHLHSTLGNR WSQIAARLPG  120
RTDNEIKNFW NSTIKKKLKT NKSDASTTSP NDSINGDLSY DASTNMIGEA GTFMSMHDHD  180
IMTMCMESCL ALPTNTLSST HNNPNLIKGH DQFGHVPPLV LDNTNYDTNG GSSFLKMPSW  240
LGQGGYGDSL EVPYMHGMAN DIMNPSLGNK IIQENVNTTI NHHELVKKST HVSNHFNEAV  300
DSNIKVEEVV GFGNHWQGEN FKIAEWDFEG FLANVSSIPY LDF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G08500.1	5e-75	MYB family protein