PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc032179.1_g020.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family FAR1
Protein Properties Length: 336aa    MW: 38240.1 Da    PI: 10.5355
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc032179.1_g020.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR131.94.3e-10152234689
                   FAR1   6 YAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek..dgkwevtkleleHnHel 89 
                             A+++GF ++k+++k+    g  ++ +++Cs++g++++e  + ++ ++++++ +t+C  kl  k  k  ++ w +    + HnH++
  Cse_sc032179.1_g020.1 152 IAQSIGFLIVKARTKTD--RGYKYSIEYKCSRHGTSAREGLE-DELQQQTSTAKTNCPFKLLAKYIKgqTNGWILRVKCERHNHDF 234
                            5899********98887..6667***************9999.899999999***********99988678898888889****97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 336 aa     Download sequence    
LQKFTRKQTA EVHKKAKTAD NFTVQLLIMP QESNNTRNNT SLTFHELATS NNTSKQQATV  60
HHKKATSLTV HHKKANNTSL TVHHKKANNT SLTVHHKKAT SNNTSKQQAT SPQAKTPTSN  120
NTTSNNTMSS SPFDTQEVFP DYDVITNWVQ TIAQSIGFLI VKARTKTDRG YKYSIEYKCS  180
RHGTSAREGL EDELQQQTST AKTNCPFKLL AKYIKGQTNG WILRVKCERH NHDFIDSFHG  240
FPQAMRLKDH EFVLVEQLTK HKVAPRIILS SLKESDPDNV SSIKTIYNAQ NKIRGTIRGD  300
RTPIQVLLAH LRRQGYTYYP RVNNRTNEPE EIFLGK