PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc032086.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 573aa MW: 64132.3 Da PI: 8.3075

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc032086.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	49.7	1.2e-15	111	239	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.......................................te 49 +fY++Y+k+ GF+++ ++++ + ++ + f C++ gk++++ + ++ Cse_sc032086.1_g010.1 111 NFYRHYSKMGGFDIKLGTESNPDGSDCPSIKYFSCNRGGKKRDSMYDrhrsdsdvavrgrvngkgangaidnkgkgidlslvgdsfAK 198 6*****************9999999999********9998899********************************999 PP FAR1 50 kerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 k+ r++++ +tgC a+l+v+k + +ev+ +++eHnH+l+ Cse_sc032086.1_g010.1 199 KKFRKNTSCKTGCLAQLRVRKVDGVMYEVYVFVEEHNHPLV 239 999**********************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 573 aa Download sequence
MTHSDINCLG TISSSNNVGE SSSCSYVCGG SSSLGSDGVR VSSSGSVSDD SSSRIVSASS 60 SSSVVNVSNV GDRSVGVSSV IDGSRVWVAD VDVSLKPTKG TVFVSLVQAY NFYRHYSKMG 120 GFDIKLGTES NPDGSDCPSI KYFSCNRGGK KRDSMYDRHR SDSDVAVRGR VNGKGANGAI 180 DNKGKGIDLS LVGDSFAKKK FRKNTSCKTG CLAQLRVRKV DGVMYEVYVF VEEHNHPLVS 240 KEDMQFLMSS RDMGCSKQHF LMQVSNSNVG PVRAFKLMKE IYGGFENIGA TVVDCKNFKR 300 DVSTFIGDRD AQMVVEKLEN LEKHCEGFFV DYYKGERDSL SALFWADSCA KMNYRRFGDV 360 ISFDATFRSN KYRMVFVPFT GIDNHNRSVT FGAGLLADET MASYNWLLRA FKKAFLTDPQ 420 VVVTDQDPSM KQAIADVFPN ARHRLCMWHI MQKLSVKVGS SVCNNTDFRK RLCVVVWNDQ 480 ISPSIFEEEW KSIIDEFGLS ENKWLSDIYD MRSRWIPAFL RDEDLSGLMR TTSRSESENH 540 FFGRWTNANL TLVEFISHFD SAMDSQRYSQ RKK

Sequence ? help Back to Top

Protein Sequence Length: 573 aa Download sequence

MTHSDINCLG TISSSNNVGE SSSCSYVCGG SSSLGSDGVR VSSSGSVSDD SSSRIVSASS  60
SSSVVNVSNV GDRSVGVSSV IDGSRVWVAD VDVSLKPTKG TVFVSLVQAY NFYRHYSKMG  120
GFDIKLGTES NPDGSDCPSI KYFSCNRGGK KRDSMYDRHR SDSDVAVRGR VNGKGANGAI  180
DNKGKGIDLS LVGDSFAKKK FRKNTSCKTG CLAQLRVRKV DGVMYEVYVF VEEHNHPLVS  240
KEDMQFLMSS RDMGCSKQHF LMQVSNSNVG PVRAFKLMKE IYGGFENIGA TVVDCKNFKR  300
DVSTFIGDRD AQMVVEKLEN LEKHCEGFFV DYYKGERDSL SALFWADSCA KMNYRRFGDV  360
ISFDATFRSN KYRMVFVPFT GIDNHNRSVT FGAGLLADET MASYNWLLRA FKKAFLTDPQ  420
VVVTDQDPSM KQAIADVFPN ARHRLCMWHI MQKLSVKVGS SVCNNTDFRK RLCVVVWNDQ  480
ISPSIFEEEW KSIIDEFGLS ENKWLSDIYD MRSRWIPAFL RDEDLSGLMR TTSRSESENH  540
FFGRWTNANL TLVEFISHFD SAMDSQRYSQ RKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	7e-69	FAR1 family protein