PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc031832.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family NF-YA
Protein Properties Length: 350aa    MW: 39784.3 Da    PI: 8.2214
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc031832.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA88.41e-27290345157
              CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGr 57 
                            +ep+YVNaKQy++Il+RR++Rak+e ekkl +k rkpy h+S h+hA+rR Rg gGr
  Cse_sc031832.1_g010.1 290 QEPVYVNAKQYNAILRRRKSRAKAELEKKL-IKDRKPYFHKSCHQHAMRRVRGFGGR 345
                            69****************************.*************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 350 aa     Download sequence    
MSAWSEKDDP NDLMQMVSIP DGMEPLNDRN DVGKLNETMS RVMPGKIEAL IERTDKLDGE  60
KVTCIIADYC MGWVSKVAQK MRIRLATFCS GSAAFMALIM SVLKLLDDQV IHNNGKEAAE  120
MAGRIICNST MELEPGEFAL FPNILPIGPL LATNSFKKPV GHFWNKDSTC LTWLDQQPVS  180
SVIYVAFAFS TDFRNDTLIP IECFEEPWVL FHGNDGKPEM PSTKFFNVKI KSLTCIEHER  240
MIWIWPGNEP SSPIIPSLLP PPGFQIHVEV HPQFLEVHQA RMPLPLEMAQ EPVYVNAKQY  300
NAILRRRKSR AKAELEKKLI KDRKPYFHKS CHQHAMRRVR GFGGRSAKKT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G20910.13e-33NF-YA family protein