PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc031794.1_g020.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 265aa MW: 30752.1 Da PI: 9.8681

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc031794.1_g020.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	72.1	1.3e-22	64	170	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk..................tekerrtraetrtgCkaklkvkk 70 kfY++YA+e GF+vr+ +k++k+++ t + fvC +eg + + ++ ++ +rr+r+++r+gC+akl++++ Cse_sc031794.1_g020.1 64 KFYKDYAREGGFEVRRGDKKNQKNDD-PTLKYFVCAREGVKPSATNLnkktnnlqtnesqshvvnEVIKRRKRPSQRCGCQAKLRIRR 150 6**************988875555.99999***9988766678899*******99899999************* PP FAR1 71 ekdgkwevtkleleHnHela 90 +++kw+v+k+ ++HnH+l+ Cse_sc031794.1_g020.1 151 ISENKWVVYKFLEKHNHKLV 170 ****************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 265 aa Download sequence
MLLGETSTPI SNHNVQHLDI HDDQSVPQVG SYQPTPEGSK FWVPDAKNKP VEGTEFDTLE 60 LALKFYKDYA REGGFEVRRG DKKNQKNDDP TLKYFVCARE GVKPSATNLN KKTNNLQTNE 120 SQSHVVNEVI KRRKRPSQRC GCQAKLRIRR ISENKWVVYK FLEKHNHKLV REEDYMYLKL 180 LYHLSNANLG PTRAWKVFKE MCGGFENIGV TDVECRNYKR GLTNFIGTRD AQMVVEKLLS 240 RQEFCQKFSV EFKRNKADKT LVGLF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	2e-19	FAR1 family protein